CDSeq MATLAB code. CDSeq is a novel computational complete deconvolution method for dissecting tissue heterogeneity.
☆11Oct 10, 2020Updated 5 years ago
Alternatives and similar repositories for CDSeq
Users that are interested in CDSeq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Jul 6, 2020Updated 5 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Aug 22, 2025Updated 8 months ago
- ☆14Dec 23, 2021Updated 4 years ago
- code implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution☆10Jan 31, 2020Updated 6 years ago
- Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)☆61Apr 3, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆11Mar 13, 2022Updated 4 years ago
- deconvolution for RNAseq and bisulfite sequencing☆12Aug 17, 2020Updated 5 years ago
- A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.☆11Oct 20, 2017Updated 8 years ago
- Comparison of single cell normalization strategies☆11Aug 13, 2021Updated 4 years ago
- ☆16Nov 11, 2022Updated 3 years ago
- Robust and Accurate Deconvolution☆13Oct 18, 2020Updated 5 years ago
- H. Bengtsson, A Unifying Framework for Parallel and Distributed Processing in R using Futures, The R Journal, 10.32614/RJ-2021-048, 2021☆10Jan 24, 2026Updated 3 months ago
- ☆16May 10, 2022Updated 3 years ago
- CADRE: Contextual Attention-based Drug REsponse☆12Nov 23, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bayesian Consensus Clustering, packaged up from code by Eric F. Lock☆19Jun 15, 2023Updated 2 years ago
- AtlasPatch: An Efficient and Scalable Tool for Whole Slide Image Preprocessing☆49Apr 9, 2026Updated 3 weeks ago
- testing code for ``Web Stereo Video Supervision for Depth Prediction from Dynamic Scenes''☆15Nov 5, 2019Updated 6 years ago
- An easy to use Julia framework for agent based modeling.☆13Dec 22, 2023Updated 2 years ago
- Basic Ember.js visualizations built in D3.☆92Sep 2, 2013Updated 12 years ago
- Some sleuth walkthroughs to help you get started☆10Jul 26, 2018Updated 7 years ago
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 7 years ago
- Nested Dichotomy Logistic Regression Models☆10Mar 27, 2026Updated last month
- Multi-modal Bayesian embedding model☆18Jun 30, 2016Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PyTorch implementation of Deep Survival Models.☆18Dec 22, 2017Updated 8 years ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Jan 20, 2025Updated last year
- ☆12Dec 21, 2021Updated 4 years ago
- ☆11Jun 3, 2018Updated 7 years ago
- ☆13Jul 21, 2021Updated 4 years ago
- A Julia package for Latent Class Analysis (LCA)☆10Jan 9, 2025Updated last year
- Immunology-related bioinformatics data and tools☆76Apr 30, 2024Updated 2 years ago
- scID☆14Oct 21, 2021Updated 4 years ago
- slideToolkit: a free toolset for analyzing full size virtual histology slides☆11May 22, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Jul 29, 2020Updated 5 years ago
- ☆18Nov 26, 2018Updated 7 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- Locus and lineage tests for bacterial GWAS☆28Oct 5, 2017Updated 8 years ago
- Calibrated clustering via knockoffs for single-cell genomics☆11Feb 13, 2025Updated last year
- ☆11Jun 26, 2020Updated 5 years ago
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago