jts / methylation-analysisLinks
☆46Updated 8 years ago
Alternatives and similar repositories for methylation-analysis
Users that are interested in methylation-analysis are comparing it to the libraries listed below
Sorting:
- A software for calculating telomere length☆73Updated 7 years ago
- processing 10x genomics reads☆27Updated 6 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last week
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- ☆51Updated 6 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Long-read splice alignment with high accuracy☆64Updated last year
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- ☆30Updated 5 years ago
- microRNA PREdiction From small RNA-seq data☆31Updated 8 years ago
- ☆24Updated last year
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- Evolutionary Transcriptomics with R☆47Updated this week
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 7 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 10 months ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆25Updated 9 years ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆58Updated last year
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- ☆26Updated last year
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆72Updated last month
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆28Updated 5 years ago
- HMM-HDP models for MinION signal alignments☆46Updated 8 years ago
- NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data☆38Updated 4 years ago
- for visual evaluation of read support for structural variation☆56Updated last year