cmap / cmapR
Tools for manipulating annotated data matrices
☆89Updated 3 years ago
Alternatives and similar repositories for cmapR:
Users that are interested in cmapR are comparing it to the libraries listed below
- ConsensusTME Gene Sets and R Script☆39Updated 8 months ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- An R interface to enrichR☆87Updated last week
- R Package for Single-Cell Dataset Processing and Visualization☆61Updated 3 years ago
- Clone of the Bioconductor repository for the scran package.☆41Updated 5 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆91Updated 4 months ago
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆42Updated last year
- ☆53Updated 4 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆93Updated 4 years ago
- Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory …☆14Updated last year
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated 2 years ago
- ☆59Updated 5 years ago
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆28Updated last year
- An r package that works as a wrapper to homologene☆42Updated last year
- Toolbox with R scripts☆38Updated 6 years ago
- Toolkit for Single-Cell Velocity☆54Updated last month
- Mouse cell atlas☆60Updated 4 years ago
- Create stacked violin plot☆45Updated 2 years ago
- A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data☆25Updated 4 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆71Updated 3 years ago
- R package for specialised analysis of single cell data☆36Updated 2 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆26Updated last year
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated last year
- Content for the OSCA Book.☆66Updated last year
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆79Updated last year
- Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data☆29Updated 11 months ago
- Explore and share your scRNAseq clustering results☆48Updated last year
- ☆36Updated 4 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆90Updated last month