cmap / lincs-workshop-2020Links
CMap Notebooks for LINCS 2020 Workshop
☆47Updated 4 years ago
Alternatives and similar repositories for lincs-workshop-2020
Users that are interested in lincs-workshop-2020 are comparing it to the libraries listed below
Sorting:
- Knowledge-primed neural networks☆38Updated 2 years ago
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- Connectivity Map analysis in MATLAB☆46Updated 3 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆55Updated 5 months ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236☆47Updated 4 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆72Updated this week
- Python package to load and query ARCHS4 data☆24Updated 3 months ago
- ☆56Updated last month
- DIABLO - an integrative multi-group, multi-dataset classification method☆26Updated 6 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated 6 months ago
- Functional Embedding of Gene Signatures☆47Updated last year
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- What you need to process the Quarterly DepMap-Omics releases from Terra☆124Updated last month
- ACTIONet single-cell analysis framework☆43Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated last month
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Updated 3 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆60Updated 4 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆73Updated 2 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- Comprehensive survival analyses on the TCGA data.☆18Updated 3 years ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- ☆38Updated last year
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆18Updated 5 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆33Updated 7 months ago