CMap Notebooks for LINCS 2020 Workshop
☆49Sep 23, 2021Updated 4 years ago
Alternatives and similar repositories for lincs-workshop-2020
Users that are interested in lincs-workshop-2020 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for manipulating annotated data matrices☆93Oct 13, 2021Updated 4 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 5 months ago
- Connectivity Map analysis in MATLAB☆49Dec 10, 2021Updated 4 years ago
- ☆12Apr 17, 2024Updated last year
- workshop platform provider for running docker containers on kubernetes☆19Sep 14, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆20Aug 25, 2024Updated last year
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Oct 31, 2025Updated 5 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Feb 8, 2020Updated 6 years ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Apr 18, 2022Updated 3 years ago
- Manubot for white paper☆13Sep 29, 2020Updated 5 years ago
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆15Mar 9, 2026Updated last month
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆14Mar 18, 2026Updated 3 weeks ago
- Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously☆37Mar 20, 2023Updated 3 years ago
- ☆14Mar 15, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Counterfactual generation of tumor perturbations from multiplexed tissue images☆23May 13, 2025Updated 10 months ago
- Phenotype Associated Spatial Signature Analysis with Graph-based Embedding☆26Mar 5, 2025Updated last year
- Analysis notebooks and data for AML hierarchies paper☆19Jun 28, 2023Updated 2 years ago
- ChromDiff program as described in Yen and Kellis, Nature Communications 2015.☆14May 12, 2016Updated 9 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆29Jan 29, 2025Updated last year
- Learning a genome-wide score of conservation at the functional genomics level between human and mouse☆14Sep 23, 2022Updated 3 years ago
- Scripts supporting identification of genomic features affecting survival time in cancer☆12Dec 6, 2018Updated 7 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Sep 19, 2017Updated 8 years ago
- Scripts associated with the 2023 Open Problems competition☆11Nov 23, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆27Sep 24, 2020Updated 5 years ago
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- ☆10Dec 15, 2023Updated 2 years ago
- This is an updated version of the MolecularTransformer of Schwaller et. al.☆14Jan 17, 2022Updated 4 years ago
- ☆15Jul 21, 2025Updated 8 months ago
- CeSpGRN: Inferring cell specific GRN using single-cell gene expression data☆21Mar 23, 2026Updated 2 weeks ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Oct 25, 2024Updated last year
- Command line client and Python libraries for CosmosID API☆12Oct 28, 2025Updated 5 months ago
- Base image providing dependencies for ASKCOS Docker images☆12Jun 14, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Jul 19, 2022Updated 3 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆31Feb 17, 2023Updated 3 years ago
- Devel repository for bsseq☆39Feb 6, 2026Updated 2 months ago
- ☆31Nov 15, 2022Updated 3 years ago
- 3D molecular structure generation for MD simulation☆10Apr 29, 2020Updated 5 years ago
- Framework for sensitive DE testing (using neighbourhoods)☆76Nov 11, 2025Updated 4 months ago
- ☆24Feb 9, 2025Updated last year