njpipeorgan / L1000-bayesian
L1000 peak deconvolution based on Bayesian analysis
☆25Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for L1000-bayesian
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆46Updated 3 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆61Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆62Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆66Updated 6 months ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆46Updated 5 months ago
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆13Updated this week
- Functional Embedding of Gene Signatures☆36Updated 8 months ago
- ☆40Updated 2 years ago
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆32Updated 2 weeks ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆29Updated this week
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆20Updated 3 months ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆33Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆46Updated 6 months ago
- Neural networks for deep mutational scanning data☆66Updated this week
- ☆44Updated 11 months ago
- ☆33Updated last month
- Large language modeling applied to T-cell receptor (TCR) sequences.☆47Updated 2 years ago
- TEIM: TCR-Epitope Interaction Modeling☆43Updated last year
- ☆18Updated 5 months ago
- ☆13Updated 2 years ago
- ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence☆14Updated 4 years ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆37Updated 3 months ago
- ☆14Updated last month
- A visible neural network model for drug response prediction☆129Updated last year
- ☆29Updated 10 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆28Updated last year
- identification of immunogenic neoepitopes☆11Updated last year
- ☆11Updated 11 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆14Updated 2 months ago
- A visualization software for antibody multi sequence alignment☆15Updated 4 months ago