Alternatives and similar repositories for L1000-bayesian

Users that are interested in L1000-bayesian are comparing it to the libraries listed below

• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆51Updated 4 years ago
• kadiliissaar / DeePhase
  DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…
  ☆17Updated 3 years ago
• bm2-lab / PanPep
  ☆50Updated last year
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆73Updated 2 years ago
• kekegg / DLEPS
  A Deep Learning based Efficacy Prediction System for drug discovery
  ☆71Updated 2 years ago
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆82Updated last year
• bsml320 / VAEN
  A deep generative neural network based approach to impute drug response
  ☆21Updated 4 years ago
• MaayanLab / L1000toRNAseq
  ☆19Updated 3 years ago
• schumacherlab / STAPLER
  STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…
  ☆28Updated 5 months ago
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆56Updated 3 years ago
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆53Updated 2 months ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• djwooten / synergy
  Python library for calculting synergy of drug combinations using several drug synergy frameworks
  ☆36Updated 11 months ago
• schumacherlab / TCRvdb
  TCR validated database
  ☆41Updated 5 months ago
• jbloomlab / SARS-CoV-2-RBD_DMS
  Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
  ☆46Updated 3 years ago
• piercelab / tcrmodel2
  ☆45Updated 6 months ago
• myzhengSIMM / TranSiGen
  ☆33Updated 8 months ago
• RainaBio / GEMORNA
  This repository hosts the software of GEMORNA, a generative AI tool for mRNA sequence design.
  ☆43Updated last month
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆21Updated last week
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆69Updated 4 months ago
• TencentAILabHealthcare / DeepAIR
  ☆38Updated 2 years ago
• samsledje / D-SCRIPT
  A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
  ☆104Updated last month
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆24Updated last year
• astrazeneca-cgr-publications / DrugnomeAI-release
  ☆18Updated last year
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆42Updated last year
• hosseinshn / MOLI
  MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction
  ☆55Updated 5 years ago
• a96123155 / TransPHLA-AOMP
  ☆48Updated 3 years ago
• idekerlab / DrugCell
  A visible neural network model for drug response prediction
  ☆148Updated 2 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago