Scripts to perform analysis in Agreement between two large pan-cancer CRISPR-Cas9 gene dependency datasets
☆13Dec 5, 2019Updated 6 years ago
Alternatives and similar repositories for Comparative-Analysis
Users that are interested in Comparative-Analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆31Apr 16, 2020Updated 6 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 6 years ago
- ☆14Sep 4, 2021Updated 5 years ago
- ☆29Mar 16, 2023Updated 3 years ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Optimizing blood-brain barrier permeation through Deep Reinforcement Learning for de novo drug design☆14Apr 22, 2021Updated 5 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆25Feb 13, 2021Updated 5 years ago
- De Novo Drug Design by Iterative Multi-Objective Deep Reinforcement Learning with graph-based Molecular Quality Assessment☆17Mar 20, 2023Updated 3 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Mar 21, 2021Updated 5 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Jul 19, 2022Updated 4 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Dec 4, 2018Updated 7 years ago
- RJT-RL: De novo molecular design using a Reversible Junction Tree and Reinforcement Learning☆24Aug 22, 2022Updated 4 years ago
- ☆11Apr 22, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- RNA seq analysis using Bioconductor (analysis built on limma, edgeR)☆12Sep 23, 2022Updated 4 years ago
- Binding Affinity Prediction using Deep learning models☆12Jun 9, 2021Updated 5 years ago
- Bayesian Logistic Regression with Hyper-LASSO priors☆10Oct 26, 2026Updated 2 weeks ago
- Tutorial for the usage of the dcTMD approach and Langevin simulations employing the trypsin-benzamidine complex as example.☆11Jul 15, 2024Updated 2 years ago
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆17Oct 11, 2021Updated 5 years ago
- Code associated with MIX-seq manuscript☆16Aug 26, 2020Updated 6 years ago
- ☆12Dec 10, 2020Updated 5 years ago
- ☆13Nov 15, 2020Updated 5 years ago
- Molecule Sketcher and Fast Parsing of Multiple Compounds to Tables with Y-label Annotation and Name. Even Images to SMIlLES conversion 🧪☆12Jul 16, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- a deep learning framework for essential protein prediction☆13Mar 24, 2023Updated 3 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Software tools for fragment-based drug discovery (FBDD)☆27Apr 6, 2020Updated 6 years ago
- ☆23Mar 11, 2023Updated 3 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 4 years ago
- ☆10May 17, 2021Updated 5 years ago
- ☆10Sep 25, 2019Updated 7 years ago
- Volume-regularized NMF☆18Apr 14, 2022Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Paper for release☆11Sep 24, 2021Updated 5 years ago
- Carcinogenicity prediction with graph neural networks☆11Feb 28, 2023Updated 3 years ago
- ☆26Sep 26, 2022Updated 4 years ago
- Data and code of the experiments for "Network-Based Drug-Target Interaction Prediction with Probabilistic Soft Logic"☆11Nov 19, 2018Updated 7 years ago
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 7 years ago
- ☆18Aug 5, 2023Updated 3 years ago
- Extended version of the Chemprop framework that allows the calculation of atomistic and molecular Jazzy/Kallisto features.☆16Jan 10, 2025Updated last year
Are these results useful?