Connectivity Map analysis in MATLAB
☆49Dec 10, 2021Updated 4 years ago
Alternatives and similar repositories for cmapM
Users that are interested in cmapM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for manipulating annotated data matrices☆93Oct 13, 2021Updated 4 years ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆140Jul 19, 2022Updated 3 years ago
- L1000 peak deconvolution based on Bayesian analysis☆28Oct 10, 2021Updated 4 years ago
- ☆11Nov 24, 2022Updated 3 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Dec 7, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Apr 15, 2022Updated 4 years ago
- Analysis notebooks and data for AML hierarchies paper☆19Jun 28, 2023Updated 2 years ago
- K-RET: Knowledgeable Biomedical Relation Extraction System☆10Feb 22, 2025Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Apr 16, 2020Updated 6 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- CMap Notebooks for LINCS 2020 Workshop☆49Sep 23, 2021Updated 4 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- Reproduce analyses in Harmony Manuscript☆11Feb 21, 2020Updated 6 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- Publication Page for MPAL Paper 2019☆85Jun 25, 2020Updated 5 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Jun 24, 2024Updated last year
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆33Aug 4, 2022Updated 3 years ago
- ☆56Apr 6, 2020Updated 6 years ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 5 years ago
- Molecular Data Provider☆10Dec 17, 2025Updated 4 months ago
- ☆32Apr 1, 2026Updated 3 weeks ago
- ☆13Nov 30, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Relative Expression Ordering Analysis (REOA) package☆21Nov 12, 2022Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Nov 11, 2019Updated 6 years ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Drug Response Variational Autoencoder☆34Apr 4, 2019Updated 7 years ago
- ☆12Jul 11, 2022Updated 3 years ago
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Code to go along with https://doi.org/10.1016/j.cell.2022.09.010☆21Mar 16, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆15Apr 13, 2021Updated 5 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Apr 8, 2023Updated 3 years ago
- ☆20Aug 28, 2022Updated 3 years ago
- PhenoPLIER☆15Apr 8, 2024Updated 2 years ago
- Toolbox with R scripts☆38Sep 21, 2018Updated 7 years ago
- Predicting assays Using Morphological Analysis☆14May 24, 2024Updated last year