Connectivity Map analysis in MATLAB
☆49Dec 10, 2021Updated 4 years ago
Alternatives and similar repositories for cmapM
Users that are interested in cmapM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for manipulating annotated data matrices☆93Oct 13, 2021Updated 4 years ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆140Jul 19, 2022Updated 3 years ago
- L1000 peak deconvolution based on Bayesian analysis☆28Oct 10, 2021Updated 4 years ago
- ☆11Nov 24, 2022Updated 3 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Dec 7, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Apr 15, 2022Updated 3 years ago
- Analysis notebooks and data for AML hierarchies paper☆19Jun 28, 2023Updated 2 years ago
- K-RET: Knowledgeable Biomedical Relation Extraction System☆10Feb 22, 2025Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Apr 16, 2020Updated 5 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- CMap Notebooks for LINCS 2020 Workshop☆49Sep 23, 2021Updated 4 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- Reproduce analyses in Harmony Manuscript☆11Feb 21, 2020Updated 6 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- Publication Page for MPAL Paper 2019☆85Jun 25, 2020Updated 5 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Jun 24, 2024Updated last year
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆32Aug 4, 2022Updated 3 years ago
- ☆56Apr 6, 2020Updated 6 years ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 5 years ago
- Molecular Data Provider☆10Dec 17, 2025Updated 3 months ago
- ☆29Apr 1, 2026Updated last week
- Patient Genomics Research Case☆14Jun 12, 2019Updated 6 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆13Nov 30, 2018Updated 7 years ago
- Relative Expression Ordering Analysis (REOA) package☆21Nov 12, 2022Updated 3 years ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Drug Response Variational Autoencoder☆34Apr 4, 2019Updated 7 years ago
- This repository contains HCA Benchmarking codes☆26Nov 11, 2019Updated 6 years ago
- ☆12Jul 11, 2022Updated 3 years ago
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Code to go along with https://doi.org/10.1016/j.cell.2022.09.010☆21Mar 16, 2022Updated 4 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆15Apr 13, 2021Updated 4 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Nov 3, 2021Updated 4 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Apr 8, 2023Updated 3 years ago
- ☆20Aug 28, 2022Updated 3 years ago
- PhenoPLIER☆15Apr 8, 2024Updated 2 years ago