momeara / BioChemPantryLinks
Load bioinformatics datasets into a local database
☆11Updated 8 months ago
Alternatives and similar repositories for BioChemPantry
Users that are interested in BioChemPantry are comparing it to the libraries listed below
Sorting:
- mist R package files☆10Updated 7 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Updated 3 years ago
- Some examples to analyze mass spectrometry data using MALDIquant☆18Updated 3 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 7 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated last month
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 6 months ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆42Updated last month
- Interactive tool for Phosphoproteomics☆13Updated 5 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Updated 3 years ago
- A GenePattern module for running the ssGSEA method☆14Updated 9 months ago
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 8 months ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Workflow4Metabolomics meta repository☆11Updated 6 months ago
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆17Updated 5 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆13Updated 5 years ago
- Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously☆37Updated 2 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11Updated 5 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆30Updated 6 years ago
- Code to run OncoSig Analyses☆18Updated 5 years ago
- Single cell proteomics data processing☆29Updated last month
- Cancer Dependency Map package☆30Updated last year
- Single Cell multimodal data scripts for downloading datasets☆17Updated 3 weeks ago