QuantGen / BGDataLinks
A Suite of Packages for Analysis of Big Genomic Data
☆34Updated 4 months ago
Alternatives and similar repositories for BGData
Users that are interested in BGData are comparing it to the libraries listed below
Sorting:
- A matrix-like wrapper around PLINK .bed files☆19Updated 8 months ago
- ☆20Updated last month
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 8 months ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated 3 weeks ago
- Mixed models @lme4 + custom covariances + parameter constraints☆53Updated 4 years ago
- GridLMM package☆39Updated 2 weeks ago
- R package to estimate kinship and FST from SNP data☆21Updated 8 months ago
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated last month
- 1000 Genomes Project Metadata R Package☆20Updated 2 years ago
- logistic factor analysis☆16Updated last month
- Automate package and project setup for Bioconductor packages☆53Updated 2 months ago
- Statistical GENetics Input/Output Functions☆18Updated 3 months ago
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated 2 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆16Updated last month
- ☆18Updated 8 years ago
- Explore design matrices interactively with R/Shiny☆37Updated last month
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- Tidy up computational biology objects☆49Updated 6 years ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆13Updated 2 months ago
- Quantitative Trait Cluster Association Test in R☆25Updated 4 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆43Updated 5 months ago
- Sample code for ldsc analyses in UKBB☆30Updated 2 years ago