Repository containing lists of all published ancient metagenomic (and related) samples and libraries
☆86Sep 11, 2026Updated last week
Alternatives and similar repositories for AncientMetagenomeDir
Users that are interested in AncientMetagenomeDir are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Additional supplementary information and code, data repository for Fellows Yates, J.A. et al. (2021) PNAS. DOI: http://dx.doi.org/10.1073…☆13Oct 20, 2021Updated 4 years ago
- ☆15Mar 13, 2026Updated 6 months ago
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆215Sep 11, 2026Updated last week
- Ancient microbiome snakemake workflow☆32Jun 12, 2026Updated 3 months ago
- Coprolite host Identification pipeline☆14Sep 1, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Introduction to Ancient Metagenomics Book☆16Sep 10, 2026Updated last week
- mapping pipeline for ancient DNA☆35Sep 2, 2026Updated 2 weeks ago
- ☆15May 30, 2024Updated 2 years ago
- A post-mapping authentication toolkit for ancient metagenomics☆22Mar 30, 2026Updated 5 months ago
- A Java based tool to determine damage patterns on ancient DNA as a replacement for mapDamage☆22Nov 18, 2023Updated 2 years ago
- ☆21Dec 15, 2023Updated 2 years ago
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Sep 7, 2026Updated last week
- Damage parameter estimation for ancient DNA☆19Aug 26, 2026Updated 3 weeks ago
- A simple tool to calculate metrics from a BAM file and filter references with uneven coverages☆24Apr 24, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Nov 19, 2021Updated 4 years ago
- A repo with just adapter sequences☆15Jul 7, 2025Updated last year
- "Archaeogenetics analysis of Anatolia"☆14Jan 27, 2021Updated 5 years ago
- ☆16Feb 11, 2022Updated 4 years ago
- gargammel is an ancient DNA simulator☆39Aug 18, 2026Updated last month
- A pipeline for the analysis of sedimentary ancient mtDNA.☆18Aug 26, 2026Updated 3 weeks ago
- ☆12Mar 11, 2022Updated 4 years ago
- Maximum a posteriori estimate of contamination for ancient samples☆25Sep 2, 2026Updated 2 weeks ago
- a pipeline to cluster proteins into families☆10Apr 1, 2020Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Software for ancestry estimation in unrelated individuals☆25Jan 31, 2026Updated 7 months ago
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆20Aug 17, 2026Updated last month
- multiGenomicContext is a pipeline to see your protein in many genomic context as much as gbk you have.☆11Oct 10, 2022Updated 3 years ago
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated 2 years ago
- ☆24Jun 9, 2021Updated 5 years ago
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 24, 2026Updated last month
- The Poseidon Community Archive (PCA). Download from here: https://server.poseidon-adna.org/explorer/community-archive NOT through the G…☆18Sep 2, 2026Updated 2 weeks ago
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes