snystrom / memesLinks
An R interface to the MEME Suite
☆50Updated 7 months ago
Alternatives and similar repositories for memes
Users that are interested in memes are comparing it to the libraries listed below
Sorting:
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 4 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- Reduce + Visualize Gene Ontology☆28Updated last month
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆84Updated 4 months ago
- R package wrapping bedtools☆41Updated 2 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago
- Tutorial Website☆59Updated 4 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆70Updated last month
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- GREAT Analysis - Functional Enrichment on Genomic Regions☆87Updated 2 months ago
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 4 months ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆46Updated last year
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- ☆49Updated 4 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated 2 months ago
- ☆38Updated 2 years ago
- ☆30Updated 6 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated 10 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 2 weeks ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- HMMRATAC peak caller for ATAC-seq data☆100Updated 6 months ago
- R package for genomic feature analysis and visualization☆78Updated last month
- 🧬 Gene analysis toolkit based on R☆57Updated 4 months ago
- BigWig and BAM utilities☆96Updated last year
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year