Alternatives and similar repositories for memes:

Users that are interested in memes are comparing it to the libraries listed below

• vivekbhr / Subread_to_DEXSeq
  Scripts to import your FeatureCounts output into DEXSeq
  ☆33Updated 6 years ago
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆87Updated last month
• RamRS / biostar-mod-templates
  Moderator Templates for https://www.biostars.org/
  ☆11Updated 4 years ago
• vastgroup / vast-tools
  A toolset for profiling alternative splicing events in RNA-Seq data.
  ☆81Updated 3 months ago
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆27Updated last week
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆76Updated 3 weeks ago
• nerettilab / RepEnrich2
  RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.
  ☆39Updated 3 years ago
• williamritchie / IRFinder
  Detecting intron retention from RNA-Seq experiments
  ☆55Updated 9 months ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 6 years ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• kundajelab / phantompeakqualtools
  This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…
  ☆59Updated 4 years ago
• ParkerLab / ataqv
  A toolkit for QC and visualization of ATAC-seq results.
  ☆69Updated 3 months ago
• ivanek / Gviz
  This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
  ☆83Updated 3 months ago
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆59Updated 4 years ago
• databio / pepatac
  A modular, containerized pipeline for ATAC-seq data processing
  ☆57Updated last month
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆70Updated last week
• YosefLab / ImpulseDE2
  ☆38Updated 2 years ago
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆29Updated 6 years ago
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• LiuLabUB / HMMRATAC
  HMMRATAC peak caller for ATAC-seq data
  ☆100Updated 5 months ago
• hbctraining / Intro-to-rnaseq-hpc-salmon
  ☆49Updated 4 years ago
• Danko-Lab / tutorials
  Tutorials covering various topics in genomic data analysis.
  ☆17Updated 6 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 5 years ago
• Novartis / easyTrackHubs
  This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…
  ☆28Updated last year
• Henikoff / Cut-and-Run
  ☆30Updated 6 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆40Updated last month
• brwnj / fastq-multx
  Demultiplexes a fastq.
  ☆44Updated 4 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• ChristopherWilks / megadepth
  BigWig and BAM utilities
  ☆96Updated last year
• pachterlab / kallisto-transcriptome-indices
  Reference transcriptome indices build from kallisto for popular organisms
  ☆42Updated last year