snystrom / memes

Related projects ⓘ

Alternatives and complementary repositories for memes

• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆22Updated 2 weeks ago
• vivekbhr / Subread_to_DEXSeq
  Scripts to import your FeatureCounts output into DEXSeq
  ☆31Updated 6 years ago
• ivanek / Gviz
  This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
  ☆75Updated last year
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆85Updated 3 months ago
• williamritchie / IRFinder
  Detecting intron retention from RNA-Seq experiments
  ☆53Updated 4 months ago
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆29Updated 5 years ago
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• vastgroup / vast-tools
  A toolset for profiling alternative splicing events in RNA-Seq data.
  ☆79Updated 4 months ago
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆53Updated 3 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆37Updated 2 months ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆35Updated 6 years ago
• nerettilab / RepEnrich2
  RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.
  ☆36Updated 2 years ago
• databio / pepatac
  A modular, containerized pipeline for ATAC-seq data processing
  ☆54Updated last week
• databio / awesome-atac-analysis
  Links to ATAC-seq analysis tools
  ☆50Updated 3 years ago
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆66Updated 2 weeks ago
• ParkerLab / ataqv
  A toolkit for QC and visualization of ATAC-seq results.
  ☆66Updated last month
• bjmt / universalmotif
  Motif manipulation functions for R.
  ☆25Updated last week
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆29Updated 11 months ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆74Updated 4 years ago
• ratschlab / pancanatlas_code_public
  Public repository containing research code for the TCGA PanCanAtlas Splicing project
  ☆41Updated 3 years ago
• YosefLab / ImpulseDE2
  ☆37Updated 2 years ago
• SGDDNB / translational_regulation
  Detection of differential translated genes using Ribo-seq
  ☆14Updated 3 years ago
• hbctraining / publication_perfect
  Six hour hands-on to creating publication-quality plots in R
  ☆24Updated last year
• NKI-GCF / XenofilteR
  Filtering of PDX samples for mouse derived reads
  ☆27Updated last year
• PeeperLab / Rtoolbox
  Toolbox with R scripts
  ☆38Updated 6 years ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆34Updated 8 months ago
• rnabioco / djvdj
  An R package to analyze single-cell V(D)J data
  ☆24Updated last year
• noush-joglekar / scisorseqr
  scisorseqr is an R-package for processing of single-cell long read data and analyzing differential isoform expression across any two cond…
  ☆36Updated last year
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆19Updated 6 years ago