jcchan23 / GraphSolLinks
Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted contact map"
☆74Updated 3 years ago
Alternatives and similar repositories for GraphSol
Users that are interested in GraphSol are comparing it to the libraries listed below
Sorting:
- ☆86Updated 2 years ago
- Diffusion model based protein-ligand flexible docking method☆108Updated 9 months ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- ☆70Updated 4 years ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆75Updated 2 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆23Updated 2 months ago
- ☆85Updated last week
- open source repository☆139Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- ☆110Updated 2 years ago
- ☆76Updated last year
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- ☆72Updated 5 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆136Updated last month
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆43Updated 3 weeks ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- Antibody-specific masked language model☆57Updated 2 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- ☆105Updated 2 months ago
- A Python 3 version of the protein descriptor package propy☆43Updated 2 years ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated 11 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆62Updated last month
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 3 weeks ago
- ☆47Updated last year
- Antibody Binding Mutational Database☆33Updated 6 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆42Updated 2 years ago
- Transformer Based Language Model for Peptide Property Prediction☆46Updated last year
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Updated last year