jcchan23 / GraphSolLinks
Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted contact map"
☆76Updated 3 years ago
Alternatives and similar repositories for GraphSol
Users that are interested in GraphSol are comparing it to the libraries listed below
Sorting:
- ☆89Updated 3 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆82Updated 4 months ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆42Updated 11 months ago
- Diffusion model based protein-ligand flexible docking method☆115Updated last year
- VenusFSFP: Few-Shot Protein Fitness Prediction☆101Updated 2 weeks ago
- ☆83Updated last week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆78Updated 3 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- ☆92Updated last month
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆78Updated 6 months ago
- ☆72Updated last month
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆68Updated 5 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 6 months ago
- ☆79Updated last year
- ☆73Updated 5 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆56Updated 4 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆39Updated last year
- Extension of ThermoMPNN for double mutant predictions☆49Updated 2 months ago
- ☆46Updated 6 months ago
- DLPacker☆31Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆75Updated 5 years ago
- ☆114Updated 3 years ago
- Antibody Binding Mutational Database☆36Updated 6 years ago
- A Python 3 version of the protein descriptor package propy☆46Updated 2 years ago
- ☆20Updated 3 years ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆51Updated this week
- Physical energy function for protein sequence design☆34Updated 2 years ago