morgannprice / PaperBLAST
PaperBLAST: find papers about a protein or its homologs
☆39Updated 2 months ago
Alternatives and similar repositories for PaperBLAST:
Users that are interested in PaperBLAST are comparing it to the libraries listed below
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated 2 weeks ago
- Pipeline for major biological analyses.☆34Updated 3 years ago
- ☆38Updated last week
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆47Updated 2 months ago
- Protein Alignment and Detection Interface☆61Updated last year
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆41Updated 3 months ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- A workflow and scripts for large-scale antiSMASH analyses☆39Updated last week
- PHANOTATE: a tool to annotate phage genomes.☆73Updated 4 months ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆48Updated 2 weeks ago
- ☆45Updated last year
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆67Updated 3 months ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- CLI tool to annotate genes with KOfam☆78Updated last year
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- A toolkit for prokaryotic comparative genomics☆47Updated 2 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆58Updated this week
- BEAV: Bacterial Element Annotation reVamped☆64Updated 5 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆27Updated this week
- Python tool to reduce size and redundancy of phylogenetic datasets☆35Updated last year
- A package to annotate protein sequences☆56Updated last month
- Bioinformatic Tools for study Evolution of metabolic diversity☆32Updated last year
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆54Updated 8 months ago
- ☆29Updated 3 weeks ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆39Updated 2 years ago
- ☆69Updated last month
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- a python package for automated generation of phylogenetic trees from genbank files☆21Updated last month