morgannprice / PaperBLAST
PaperBLAST: find papers about a protein or its homologs
☆35Updated last week
Related projects ⓘ
Alternatives and complementary repositories for PaperBLAST
- ☆35Updated 2 weeks ago
- Pipeline for major biological analyses.☆34Updated 2 years ago
- ☆43Updated last year
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆37Updated 7 months ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated 3 months ago
- Protein Alignment and Detection Interface☆61Updated 7 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆21Updated 7 months ago
- This repository contains all source code in the reconstructor python package, installation instructions, important file dependencies, and…☆17Updated 3 months ago
- BiG-MEx implementation as Docker images and R packages☆12Updated 2 years ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆21Updated last year
- Bioinformatic Tools for study Evolution of metabolic diversity☆30Updated 8 months ago
- Pipelines used in the lab.☆11Updated last month
- The Microbial Co-occurrence Network Explorer☆19Updated last year
- ☆19Updated 2 years ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆42Updated 2 months ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- PHANOTATE: a tool to annotate phage genomes.☆70Updated last month
- Bacterial Annotation by Learned Representation of Genes☆54Updated 3 years ago
- Chimera: An easy to use pipeline for Genome based Metabolic Network reconstruction, evaluation and visualization.☆17Updated 2 years ago
- metabolic heatmap☆18Updated 5 years ago
- A python library for predicting phage lifestyle based on genome sequence☆35Updated last year
- Detection of incorrectly labeled sequences across kingdoms☆80Updated 2 years ago
- PLSDB pipeline to collect bacterial plasmids from NCBI☆36Updated last month
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆32Updated last year
- ☆25Updated last year
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆14Updated 3 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆30Updated 2 weeks ago
- ☆17Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆49Updated last week
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆35Updated 2 years ago