mvelinder / variant_prioritizationLinks
Curated list of resources for variant prioritization
☆12Updated 3 weeks ago
Alternatives and similar repositories for variant_prioritization
Users that are interested in variant_prioritization are comparing it to the libraries listed below
Sorting:
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- Python function for TMB snake plots☆16Updated 5 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated last week
- Filter and prioritize fusion calls☆20Updated last year
- ☆12Updated last year
- cfDNA analysis workflow☆22Updated 2 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 5 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 5 months ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆20Updated last month
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆15Updated 2 years ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆25Updated last year
- interactive plots for differential expression analysis☆34Updated 5 months ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 3 years ago
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Updated 4 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- Easily run WDL workflows on GCP☆14Updated 4 years ago
- A user-friendly Python toolkit, which provides a comprehensive pipeline to easily explore the cohort-based mutational characterization fo…☆21Updated 3 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated last year
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 6 years ago
- From QC to summary statistics☆17Updated 5 years ago