mvelinder / variant_prioritizationLinks
Curated list of resources for variant prioritization
☆12Updated 7 months ago
Alternatives and similar repositories for variant_prioritization
Users that are interested in variant_prioritization are comparing it to the libraries listed below
Sorting:
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆19Updated 3 months ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆14Updated 2 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 3 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 3 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated 4 months ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 4 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated this week
- ☆22Updated 6 months ago
- ☆22Updated 2 months ago
- Rapid and accurate ancestry inference using SNVs.☆19Updated 2 weeks ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- Toolkit for calling and analyzing de novo STR mutations☆14Updated last year
- Filter and prioritize fusion calls☆20Updated 10 months ago
- A user-friendly Python toolkit, which provides a comprehensive pipeline to easily explore the cohort-based mutational characterization fo…☆21Updated 2 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆13Updated 5 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 9 months ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- ☆18Updated 5 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- ☆12Updated last year
- ☆21Updated 2 weeks ago
- visualization tools for exon/junction coverage☆11Updated 5 years ago
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Updated 4 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- ☆12Updated last year
- Allele frequency filtering for Mendelian variant discovery☆18Updated 8 years ago