haniffalab / webatlas-appLinks
An application to display spatial and single-cell experiment data. Built in React, on the Vitessce framework.
☆14Updated 2 months ago
Alternatives and similar repositories for webatlas-app
Users that are interested in webatlas-app are comparing it to the libraries listed below
Sorting:
- An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.☆30Updated this week
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆66Updated 6 months ago
- ☆29Updated last year
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆39Updated last month
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆14Updated last month
- ☆24Updated last month
- Spatial omics analysis and visualization library☆22Updated last week
- Python API and Jupyter widget for Vitessce☆60Updated 2 months ago
- ☆64Updated this week
- ☆87Updated last week
- https://sparrow-pipeline.readthedocs.io/en/latest/☆33Updated this week
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆86Updated 2 months ago
- Package for the analysis of Transcripts outside segmented cells in ST data☆24Updated last week
- ☆27Updated last year
- Analyzing cellular niches in spatial transcriptomics data