nextflow-io / hyperoptLinks
Nextflow pipeline for hyperparameter optimization of machine learning models
☆24Updated last year
Alternatives and similar repositories for hyperopt
Users that are interested in hyperopt are comparing it to the libraries listed below
Sorting:
- Nextflow plugin implementation skeleton☆10Updated 3 months ago
- Universal RObust Peak Annotator☆16Updated last year
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- Customer workshop materials☆18Updated 2 years ago
- script + metadata = standalone component☆43Updated 3 weeks ago
- Bam to Pandas DataFrame, quickly☆13Updated 2 months ago
- a minimal, scriptable genome browser for python☆51Updated 7 months ago
- A python package for showing JBrowse views☆26Updated last year
- Python Primer Design Library☆13Updated 3 months ago
- Monitor computational workflows in real time☆74Updated last year
- Access nextflow variables from python scripts or notebooks☆21Updated 4 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated 2 weeks ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆21Updated last year
- SQL support plugin for Nextflow☆31Updated 2 months ago
- ☆16Updated 7 months ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Paired Genomic Loci Tool Suite☆31Updated 2 years ago
- Container class to represent genomic locations and support genomic analysis☆22Updated last week
- Automatically source dotenv files into your Nextflow scope☆9Updated 3 months ago
- A job submitter for Portable Encapsulated Projects☆22Updated 5 months ago
- Reference genome resource manager☆75Updated last year
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Updated 2 years ago
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 2 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- The command-line interface to GGD☆43Updated 2 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆71Updated 4 months ago
- Python wrapper around Nextflow.☆59Updated last week
- Interactive multiscale visualization for structural variation in human genomes☆70Updated last week
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 3 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated last month