Nextflow pipeline for hyperparameter optimization of machine learning models
☆25May 26, 2026Updated 5 months ago
Alternatives and similar repositories for hyperopt
Users that are interested in hyperopt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated last year
- Customer workshop materials☆19May 13, 2026Updated 5 months ago
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆21Oct 5, 2026Updated 3 weeks ago
- A Nextflow pipeline for running synteny analysis.☆20Aug 2, 2026Updated 2 months ago
- SQL support plugin for Nextflow☆32Aug 10, 2026Updated 2 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Nextflow pipeline to do protein design tasks at the end of 2025.☆12Sep 29, 2026Updated last month
- Automatic Configuration GENerator and Installer for nextflow pipeline. This is a set of utilities to implement the best practises for th…☆10Jun 11, 2026Updated 4 months ago
- Proof-of-concept Nextflow pipeline to interact with OpenAI Whisper☆11Jun 17, 2025Updated last year
- Deep learning protein-protein binding sites prediction☆23Feb 2, 2023Updated 3 years ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆42Oct 5, 2026Updated 3 weeks ago
- Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.☆11Jan 6, 2026Updated 9 months ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Yet another small programming language and VM.☆12Sep 6, 2020Updated 6 years ago
- nf-core pipeline for data submission to ENA☆22Oct 23, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- CRUD API built with Laravel Lumen☆11Sep 11, 2017Updated 9 years ago
- Nextflow plugin for VIM☆50May 27, 2023Updated 3 years ago
- Luslab nextflow modules☆14Apr 30, 2021Updated 5 years ago
- Tangle your Org files☆12Feb 5, 2022Updated 4 years ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆55Feb 4, 2025Updated last year
- A VSCode extension pack for nf-core developers.☆15Mar 7, 2025Updated last year
- Libraries and command-line utilities for big data genomic analysis☆10Feb 27, 2024Updated 2 years ago
- Experimental micro-service for implementing the Zarr spec over HTTP☆21Oct 12, 2026Updated 2 weeks ago
- Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.☆110Oct 7, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 7 months ago
- Applying polygenic scores (PGS) on imputed genotypes☆36Oct 28, 2025Updated last year
- A proof of concept of RNAseq pipeline☆85Updated this week
- Quantification module for mcmicro☆11Apr 1, 2025Updated last year
- Simple test framework for Nextflow pipelines☆193Apr 27, 2026Updated 6 months ago
- Nextflow wrapper built around nf-core/modules☆12Nov 25, 2024Updated last year
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated 3 months ago
- A java library for simple progress monitoring on the console☆20Oct 13, 2020Updated 6 years ago
- Encore Analysis Server☆13Oct 1, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆96Oct 16, 2026Updated 2 weeks ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 4 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28May 17, 2022Updated 4 years ago
- Extract protein embeddings the easy way.☆10Oct 6, 2023Updated 3 years ago
- ☆38Dec 13, 2023Updated 2 years ago
- A best practices guide for Nextflow on Kubernetes☆23Nov 8, 2023Updated 2 years ago
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆36Oct 5, 2026Updated 3 weeks ago