bionode / bionode-watermillLinks
π§Bionode-Watermill: A (Not Yet Streaming) Workflow Engine
β37Updated 6 years ago
Alternatives and similar repositories for bionode-watermill
Users that are interested in bionode-watermill are comparing it to the libraries listed below
Sorting:
- Node.js module for working with the NCBI API (aka e-utils).β66Updated 5 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencingβ22Updated 9 years ago
- RNA-seq Viewer Team at the NCBI-assisted Boston Genomics Hackathonβ37Updated 7 years ago
- Server wrapper that turns command line tools into web servicesβ61Updated 6 years ago
- Parallel Recipes : parallel workflow execution made easyβ13Updated 9 years ago
- An integrated high performance bioinformatics toolkitβ23Updated 6 years ago
- paplot creates various dynamic and interactive reports for cancer genome analysis.β25Updated 2 years ago
- Streamable FASTA parser.β14Updated 5 years ago
- IPython notebooks to teach Genomics and Population Geneticsβ21Updated 8 years ago
- Curated collection of open-source bioinformatics toolsβ28Updated 6 years ago
- Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a buβ¦β30Updated this week
- conda recipes for genomic dataβ85Updated 3 years ago
- Deprecated : Use https://github.com/drpowell/degustβ44Updated 8 years ago
- Import a CWL workflow specification to Nextflow script (experimental)β27Updated 6 years ago
- Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.β51Updated last year
- Interactive Visual Analysis of differential gene expression test resultsβ22Updated 8 years ago
- Fast and accurate sequence demultiplexingβ28Updated 3 months ago
- Convert CWL to WDLβ17Updated 8 years ago
- Request for comments on interchangeable bioinformatics containersβ40Updated 5 years ago
- Analysis Framework for Biological Data from High Throughput Experimentsβ34Updated 8 years ago
- normalize, left-align, trim, validate and clean VCF filesβ20Updated 9 years ago
- NovoGraph: building whole genome graphs from long-read-based de novo assembliesβ45Updated 4 years ago
- Decentralized distributed database of genomic and clinical data.β40Updated 6 years ago
- Cancer Genome Project Insertion/Deletion detection pipeline based around Pindelβ28Updated 3 weeks ago
- A novel pipeline framework to accelerate bioinformatics analysisβ29Updated 2 years ago
- Docker images of bioinformatics softwareβ21Updated 7 years ago
- Isaac Genome Alignment Softwareβ36Updated 10 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelinesβ26Updated 7 years ago
- A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasetsβ18Updated 4 years ago
- reference free variant assemblyβ33Updated last year