funkelab / motileLinks
Multi-Object Tracker using Integer Linear Equations
☆38Updated this week
Alternatives and similar repositories for motile
Users that are interested in motile are comparing it to the libraries listed below
Sorting:
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆37Updated this week
- ☆23Updated 3 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 7 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 2 months ago
- StarDist plugin for napari☆39Updated last year
- ☆32Updated 5 months ago
- Particle tracking by solving linear assignment problem.☆57Updated this week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- A napari plugin for clustering objects according to their properties.☆88Updated this week
- Transformer-based cell tracking for live-cell microscopy☆95Updated this week
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- Optimize image processing workflows in napari☆18Updated 5 months ago
- dask empowered fast4dreg☆14Updated 10 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 5 months ago
- Python libraries for loading, running and packaging bioimage.io models☆33Updated this week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆103Updated last week
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆24Updated 5 months ago
- A 3D interactivity toolbox for napari☆37Updated 3 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- ☆35Updated last year
- Main tasks for the Fractal analytics platform☆20Updated this week
- Cookiecutter for napari plugins☆70Updated 11 months ago
- ☆40Updated this week
- A template repo used to make new napari plugins☆27Updated last week
- Napari gaming☆17Updated 3 years ago
- A stable diffusion demo for napari☆11Updated last year
- Tools for distributed alignment of massive images☆86Updated 3 weeks ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated last week