Alternatives and similar repositories for motile:

Users that are interested in motile are comparing it to the libraries listed below

• Janelia-Trackathon-2023 / traccuracy
  Utilities for computing common accuracy metrics on cell tracking challenge solutions with ground truth
  ☆29Updated last week
• bioimage-io / core-bioimage-io-python
  Python libraries for loading, running and packaging bioimage.io models
  ☆31Updated last week
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated last month
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆54Updated last week
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆18Updated last year
• weigertlab / trackastra
  ☆66Updated last month
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆23Updated 11 months ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated 7 months ago
• volume-em / empanada
  Panoptic segmentation algorithms for 2D and 3D electron microscopy images
  ☆2Updated 2 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆26Updated 4 months ago
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated 2 years ago
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆11Updated 4 months ago
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated 6 months ago
• weigertlab / tarrow
  Time arrow prediction for live-cell microscopy
  ☆18Updated 9 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated 2 months ago
• weigertlab / napari-trackastra
  napari plugin for trackastra
  ☆13Updated 5 months ago
• andy-sweet / napari-metadata
  A napari plugin to view and edit metadata
  ☆10Updated last year
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆20Updated last year
• bauerdavid / napari-nD-annotator
  ☆32Updated last month
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆49Updated last week
• guiwitz / napari-serialcellpose
  ☆15Updated 2 years ago
• royerlab / inTRACKtive
  Interactive visualization and sharing of cell tracking data in the browser
  ☆23Updated 2 weeks ago
• guiwitz / napari-convpaint
  Segment images by pixel classification based on pre-trained convolutional layer feature extraction
  ☆31Updated last week
• tlambert03 / microsim
  ☆23Updated last week
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆17Updated last week
• True-North-Intelligent-Algorithms / notebooks-and-napari-widgets-for-dl
  A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.
  ☆14Updated this week
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 5 months ago
• computational-cell-analytics / dl-for-micro
  Course and exercises on deep learning for microscopy image analysis
  ☆16Updated last year
• volume-em / empanada-napari
  Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari
  ☆22Updated 8 months ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆34Updated 4 months ago