atgu / hgdp_tgp
☆36Updated 3 months ago
Alternatives and similar repositories for hgdp_tgp:
Users that are interested in hgdp_tgp are comparing it to the libraries listed below
- Sequence kernel association test (SKAT)☆43Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated last month
- Liftover VCF files☆17Updated 8 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- A tool to plot significant regions of GWAS☆29Updated last year
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆50Updated last year
- ☆40Updated 6 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- Here we present a method to plot the outputs of RFMIX version 2☆21Updated 5 months ago
- Cross-population fine-mapping☆30Updated last month
- Burden testing against public controls☆50Updated 10 months ago
- A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying…☆64Updated 3 months ago
- Flexible Bayesian inference of mutational signatures☆33Updated last year
- R package to perform Bayesian Genome-Wide Association Studies☆38Updated last year
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆33Updated 5 months ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆55Updated 2 months ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated 11 months ago
- Fast and scalable variant annotation tool☆30Updated 2 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated this week
- PGxPOP☆16Updated last year
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Repository for resources we'd like to share with the community.☆24Updated 2 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated 11 months ago
- TOPMed analysis pipeline☆52Updated last year
- Joint calling of gVCF, following GATK4 Best Practices☆12Updated 5 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆28Updated last month
- Interactive eQTL visualizations☆13Updated 2 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- Create regional association plots from GWAS or meta-analysis☆60Updated 4 years ago
- Manhattan++☆28Updated 11 months ago