atgu / hgdp_tgp
☆40Updated 6 months ago
Alternatives and similar repositories for hgdp_tgp:
Users that are interested in hgdp_tgp are comparing it to the libraries listed below
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆28Updated 3 months ago
- Repository for resources we'd like to share with the community.☆24Updated 2 years ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated last year
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆51Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Sequence kernel association test (SKAT)☆46Updated last month
- Enhanced version of the FastQTL QTL mapper☆64Updated 2 years ago
- A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying…☆66Updated 5 months ago
- Burden testing against public controls☆50Updated last year
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆47Updated last month
- Report reverse and ambiguous strand SNPs in GWAS data☆32Updated 5 years ago
- Manhattan++☆28Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 3 months ago
- Liftover VCF files☆17Updated 8 years ago
- ☆40Updated 7 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- R package to perform Bayesian Genome-Wide Association Studies☆39Updated last year
- A Fine-Mapping pipeline☆19Updated 5 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆36Updated 8 months ago
- Colocalization analysis of genetic association signals☆51Updated 4 months ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆65Updated last week
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated last month
- Here we present a method to plot the outputs of RFMIX version 2☆23Updated 7 months ago
- Cross-population fine-mapping☆34Updated 3 months ago
- PGxPOP☆16Updated 2 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- An accurate and efficient HLA imputation method.☆26Updated 2 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Fast, integrative fine mapping with functional data☆57Updated 5 years ago