atgu / hgdp_tgpLinks
☆46Updated 5 months ago
Alternatives and similar repositories for hgdp_tgp
Users that are interested in hgdp_tgp are comparing it to the libraries listed below
Sorting:
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆43Updated 11 months ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying…☆70Updated last year
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated 2 months ago
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- Sequence kernel association test (SKAT)☆52Updated 4 months ago
- ☆40Updated 7 years ago
- ☆21Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆52Updated 9 months ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- ☆63Updated 3 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 6 months ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated last month
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Repository for resources we'd like to share with the community.☆25Updated 3 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 2 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆68Updated 8 months ago
- ☆24Updated last year
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆87Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated last week
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- causal TWAS (cTWAS)☆47Updated this week
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆37Updated 2 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago