Ripkelab / ricopiliLinks
Main ricopili repo for public releases
☆50Updated 6 months ago
Alternatives and similar repositories for ricopili
Users that are interested in ricopili are comparing it to the libraries listed below
Sorting:
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Scripts for implementing the Tractor pipeline☆51Updated last month
- An R package for creating mirrored Manhattan plots☆18Updated 3 years ago
- Colocalization analysis of genetic association signals☆53Updated 4 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- ☆35Updated 2 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 8 months ago
- ☆63Updated 3 years ago
- ☆40Updated 7 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- R package for quality control of plink genetic datasets☆59Updated last week
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 4 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆69Updated last year
- Read PLINK BED/BIM/FAM files into R☆41Updated 4 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated last week
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 5 months ago
- Sequence kernel association test (SKAT)☆52Updated 2 months ago
- Pariwise analysis of GWAS☆44Updated 7 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆41Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆50Updated 7 months ago
- methods for functional summary-based imputation☆89Updated 3 years ago
- Genotype-based Prediction (GenoPred)☆74Updated this week
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated last year
- Make LocusZoom-like plots with your own LD matrix.☆47Updated 3 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Manhattan++☆28Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆58Updated last week
- Genetics ToolboX R package☆32Updated 5 years ago