Alternatives and similar repositories for echolocatoR:

Users that are interested in echolocatoR are comparing it to the libraries listed below

• clagiamba / moloc
  ☆34Updated 4 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆21Updated last year
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 3 months ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆51Updated 2 months ago
• hakyimlab / gtex-gwas-analysis
  ☆21Updated 3 years ago
• jrs95 / gassocplot
  Regional association plots
  ☆25Updated 10 months ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated 10 months ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆26Updated 9 months ago
• totajuliusd / topr
  topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…
  ☆55Updated 4 months ago
• single-cell-genetics / limix_qtl
  ☆20Updated 7 months ago
• leelabsg / SKAT
  Sequence kernel association test (SKAT)
  ☆45Updated this week
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆28Updated 8 months ago
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆30Updated last year
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated last year
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 6 years ago
• jbryois / scRNA_disease
  Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1
  ☆18Updated 4 years ago
• opentargets / genetics-sumstat-harmoniser
  Harmonise GWAS summary statistics against a reference VCF
  ☆41Updated 3 years ago
• mkanai / ldsc-corrplot-rg
  corrplot of LDSC genetic correlation results
  ☆48Updated 2 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• atgu / ukbb_pan_ancestry
  Analyses conducting GWAS across the UKBB diverse superpopulations
  ☆48Updated 4 months ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆42Updated 2 years ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆18Updated last year