ipdgc / Manhattan-Plotter
This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3
☆12Updated 6 years ago
Alternatives and similar repositories for Manhattan-Plotter:
Users that are interested in Manhattan-Plotter are comparing it to the libraries listed below
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Updated 5 months ago
- Fine-mapping with infinitesimal effects☆15Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- Fast manhattenplots using ggplot2☆9Updated last year
- PredictDB Pipeline for GTEx v7 data☆17Updated 2 years ago
- ☆18Updated 5 months ago
- Readme☆10Updated 5 years ago
- ☆22Updated 3 years ago
- ☆16Updated last year
- Create LocusZoom-style plots in R.☆21Updated 2 years ago
- RNA-seq analysis scripts☆15Updated 3 years ago
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 3 years ago
- An R package for generating comparative regional association plots☆18Updated 3 months ago
- ☆10Updated 3 years ago
- ☆21Updated 3 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆28Updated 2 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆32Updated last month
- Filter and prioritize fusion calls☆20Updated 6 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆18Updated 7 months ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- TWAS-pipeline☆22Updated 4 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- An interactive graphical illustration of genetic associations and their biological context☆16Updated last year
- Data visualization with R☆10Updated 4 years ago
- ☆11Updated last year
- ☆18Updated 7 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Updated 4 years ago
- hands-on for NGS/SNParray CNV call trainning☆17Updated 2 years ago
- ☆17Updated 8 months ago