Alternatives and similar repositories for Manhattan-Plotter

Users that are interested in Manhattan-Plotter are comparing it to the libraries listed below

• roman-tremmel / ggfastman
  Fast manhattenplots using ggplot2
  ☆13Updated last year
• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆20Updated 2 months ago
• GP2code / GP2-Multiancestry-metaGWAS
  ☆12Updated 2 years ago
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆19Updated 5 months ago
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 5 years ago
• swvanderlaan / GWASToolKit
  A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
  ☆18Updated 11 months ago
• hakyimlab / gtex-gwas-analysis
  ☆24Updated 4 years ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 3 months ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆16Updated 2 years ago
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 5 years ago
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 8 years ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated this week
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• bernatgel / regioneR
  An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
  ☆13Updated 5 months ago
• SUwonglab / rss-net
  RSS-NET: Regression with Summary Statistics exploiting Network Topology
  ☆19Updated 6 months ago
• Xinglab / Myc-regulated_AS_PrCa_paper
  Scripts for plotting figures and running analysis throughout the manuscript
  ☆11Updated 3 years ago
• hakha-most / gwas_eqtl
  ☆18Updated 2 years ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• swvanderlaan / MetaGWASToolKit
  A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies
  ☆16Updated 3 weeks ago
• LaurenceHowe / SiblingGWAS
  Scripts for running a sibling GWAS
  ☆16Updated 3 years ago
• derekmichaelwright / gwaspr
  An R package for plotting GWAS results from the GAPIT package
  ☆14Updated 2 weeks ago
• statgen / pheweb-rg-pipeline
  Genetic correlation calculation pipeline via summary statistics for PheWeb
  ☆13Updated 6 years ago
• atgu / GWASpy
  GWAS QC, PCA, haplotype phasing, genotype imputation
  ☆18Updated 2 months ago
• lcpilling / gwasRtools
  R package for processing of GWAS output
  ☆16Updated last year
• liusihan / population-compare-pipeline
  Analysis pipelines for QTL discovery and GWAS signals interpretation
  ☆12Updated last year
• omerwe / S-PCGC
  Heritability, genetic correlation and functional enrichment estimation for case-control studies
  ☆19Updated last year
• dongwei1220 / R-Data-Visualization
  Data visualization with R
  ☆12Updated 4 years ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated 2 years ago
• raymondkiu / R-scripts-graphing-statistics
  My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq
  ☆12Updated 2 years ago
• Xinglab / GTEx-brain-sQTL
  ☆13Updated 5 years ago