This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3
☆14Mar 14, 2019Updated 7 years ago
Alternatives and similar repositories for Manhattan-Plotter
Users that are interested in Manhattan-Plotter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Jun 16, 2023Updated 3 years ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆14Jan 18, 2022Updated 4 years ago
- ☆13Sep 7, 2022Updated 4 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆22Mar 31, 2026Updated 6 months ago
- SCALLOP-INF analysis☆21Jul 7, 2026Updated 3 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Oct 15, 2026Updated 2 weeks ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆13Sep 3, 2024Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 11 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated last year
- Fast manhattenplots using ggplot2☆14Apr 24, 2026Updated 6 months ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Oct 2, 2026Updated 3 weeks ago
- This is a general (somewhat comprehensive) description of the LNG GWAS pipeline which can be used to guide researchers on how-to run a GW…☆43May 18, 2022Updated 4 years ago
- ☆20Oct 4, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A public repo to share methylation risk scores (MRS) derived from UCLA's electronic health records.☆11Aug 25, 2022Updated 4 years ago
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- PriOritizing the Candidate genes by incorporating information of Knowledge-based gene sets, Effects of variants, GWAS and TWAS☆11May 14, 2021Updated 5 years ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 7 months ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆54Feb 1, 2019Updated 7 years ago
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 7 years ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆20Oct 15, 2026Updated 2 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the…☆12Sep 11, 2026Updated last month
- ☆11Oct 7, 2026Updated 3 weeks ago
- ☆21Nov 15, 2024Updated last year
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 7 months ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Oct 16, 2026Updated 2 weeks ago
- Repository☆10Oct 23, 2024Updated 2 years ago
- https://filippob.github.io/introduction_to_gwas/☆23Jun 8, 2026Updated 4 months ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Fine-mapping with infinitesimal effects☆20May 5, 2026Updated 5 months ago
- S-LDSC scripts for use on MR server.☆10Sep 23, 2021Updated 5 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆22Aug 19, 2025Updated last year
- ☆13Apr 25, 2026Updated 6 months ago
- From QC to summary statistics☆17Jun 27, 2020Updated 6 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- Example workflows for refine.bio data☆11Jan 14, 2025Updated last year