Alternatives and similar repositories for Manhattan-Plotter:

Users that are interested in Manhattan-Plotter are comparing it to the libraries listed below

• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆18Updated 2 years ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆17Updated 2 years ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• swvanderlaan / GWASToolKit
  A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
  ☆18Updated 3 months ago
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆14Updated 11 months ago
• yuanzhongshang / GIFT
  ☆18Updated 3 months ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated last year
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 4 years ago
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated 2 months ago
• hakha-most / gwas_eqtl
  ☆16Updated last year
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 4 years ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆21Updated last year
• roman-tremmel / ggfastman
  Fast manhattenplots using ggplot2
  ☆9Updated last year
• hakyimlab / gtex-gwas-analysis
  ☆21Updated 3 years ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 8 months ago
• dongwei1220 / R-Data-Visualization
  Data visualization with R
  ☆11Updated 4 years ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 2 years ago
• mkanai / mr-forestplot
  ☆10Updated 2 years ago
• bhattacharya-a-bt / isotwas
  ☆19Updated last month
• aifimmunology / PALMO
  Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset
  ☆18Updated last year
• FINNGEN / CS-PRS-pipeline
  PRS pipeline using PRS_CS
  ☆12Updated last week
• Xinglab / Myc-regulated_AS_PrCa_paper
  Scripts for plotting figures and running analysis throughout the manuscript
  ☆11Updated 3 years ago
• SUwonglab / rss-net
  RSS-NET: Regression with Summary Statistics exploiting Network Topology
  ☆18Updated 5 months ago
• astheeggeggs / UKBB_ldsc_r2
  genetic correlation between phenotypes in the UK biobank
  ☆12Updated 11 months ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated 5 months ago
• Genentech / midasHLA
  R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…
  ☆12Updated last year
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• hbliu / Kidney_Epi_Pri
  Kidney Epigenome and Transcriptome-based multi-stage Prioritization
  ☆16Updated 2 years ago
• izhbannikov / haploR
  haploR: utilities for mining Haploreg and other similar web-based tools
  ☆9Updated 10 months ago