andreyshabalin / ramwasLinks
RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms
☆10Updated 3 years ago
Alternatives and similar repositories for ramwas
Users that are interested in ramwas are comparing it to the libraries listed below
Sorting:
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- PRS pipeline using PRS_CS☆14Updated last month
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- Genetics ToolboX R package☆32Updated 5 years ago
- An R package for generating comparative regional association plots☆18Updated 6 months ago
- causal TWAS (cTWAS)☆44Updated 2 weeks ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Code for implementing Mendelian randomization investigations☆18Updated 9 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- ☆18Updated 7 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆32Updated last month
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- GWAS gold standards repository☆37Updated last year
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 4 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- R package for applying Gamma-Poisson regression to identify statistical enrichment or depletion of somatic mutations in regions after cor…☆30Updated 2 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- eQTLHap: a comprehensive eQTL analysis tool.☆11Updated 4 years ago
- ☆20Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- Gene-level general linear mixed model☆22Updated 6 months ago
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- Colocalization analysis of genetic association signals☆52Updated last month