astrazeneca-cgr-publications / mantis-ml-releaseLinks
mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens
☆30Updated last year
Alternatives and similar repositories for mantis-ml-release
Users that are interested in mantis-ml-release are comparing it to the libraries listed below
Sorting:
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 5 months ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 3 years ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆18Updated last month
- GWAS gold standards repository☆34Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 5 months ago
- PRS-on-SPARK☆18Updated 4 years ago
- Refining the impact of genetic evidence on clinical success☆25Updated 11 months ago
- Analysis for svaseq paper☆19Updated 10 years ago
- Using BCR and expression for sequence embedding☆22Updated last week
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated last year
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- causal TWAS (cTWAS)☆43Updated this week
- ☆12Updated last year
- ☆11Updated 4 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Updated 3 years ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- Explore and download data from the recount3 project☆35Updated last month
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆32Updated 3 months ago
- cfDNA analysis workflow☆21Updated 2 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 6 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 4 years ago
- A framework to infer mutational signatures in cancer over time☆53Updated 5 years ago