Annefeng / PBK-QC-pipelineLinks
Partners Biobank genomics data QC
☆30Updated 5 years ago
Alternatives and similar repositories for PBK-QC-pipeline
Users that are interested in PBK-QC-pipeline are comparing it to the libraries listed below
Sorting:
- Analyses conducting GWAS across the UKBB diverse superpopulations☆52Updated 3 months ago
- Software for estimating correlation of trait effect sizes across populations☆47Updated 2 months ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆70Updated 4 years ago
- corrplot of LDSC genetic correlation results☆53Updated 3 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 3 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆55Updated 4 years ago
- Meta-analysis of genomewide association scans☆60Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- ☆72Updated last week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆67Updated 10 months ago
- GWAS Summary Statistics Data Harmonisation☆23Updated 2 months ago
- ☆57Updated 7 months ago
- ☆36Updated 4 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 2 months ago
- Genotype-based Prediction (GenoPred)☆72Updated 3 weeks ago
- ☆19Updated 3 weeks ago
- Pariwise analysis of GWAS☆43Updated 6 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆86Updated last week
- Hypothesis Prioritisation in multi-trait Colocalization☆54Updated last year
- Causal Mixture Model for GWAS summary statistics☆83Updated last year
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆34Updated 2 months ago
- ☆35Updated 2 years ago
- Cross-population polygenic prediction☆88Updated 9 months ago
- R package for CAUSE☆56Updated last year
- ☆29Updated 3 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆28Updated last week
- Source code of FUMA GWAS web application☆57Updated last year
- Colocalization analysis of genetic association signals☆52Updated 2 months ago
- FLAMES: Accurate gene prioritization in GWAS loci☆41Updated 5 months ago