freeseek / score
Tools to work with GWAS-VCF summary statistics files
☆118Updated 7 months ago
Alternatives and similar repositories for score:
Users that are interested in score are comparing it to the libraries listed below
- Segmented HAPlotype Estimation and Imputation Tool☆80Updated 8 months ago
- phasing and Allele Specific Expression from RNA-seq☆114Updated 9 months ago
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆110Updated 2 weeks ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆79Updated 2 years ago
- WisecondorX — An evolved WISECONDOR☆97Updated 7 months ago
- A structural variation pipeline for short-read sequencing☆187Updated this week
- MOsaic CHromosomal Alterations (MoChA) caller☆86Updated 2 months ago
- CrossMap is a python program to lift over genome coordinates from one genome version to another.☆83Updated 2 months ago
- WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery☆103Updated 4 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆54Updated 2 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆64Updated last month
- A tool for somatic structural variant calling using long reads☆128Updated this week
- ABRA2☆92Updated 2 years ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆159Updated 8 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- A tool for profiling long STRs from short reads☆97Updated 4 years ago
- ☆121Updated 3 weeks ago
- Allele-specific alignment sorting☆55Updated 2 years ago
- Check strandedness of RNA-Seq fastq files☆123Updated 2 years ago
- Relevant papers for CNV and SV approaches☆94Updated 6 months ago
- Software program for checking sample matching for NGS data☆130Updated 10 months ago
- liftover for python, made fast with cython☆88Updated 5 months ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆69Updated 8 months ago
- A suite of tools for detecting expansions of short tandem repeats☆80Updated last year
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆52Updated 4 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆145Updated 2 months ago
- BAM Statistics, Feature Counting and Annotation☆149Updated 2 months ago
- ☆91Updated 3 weeks ago
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆157Updated 2 years ago
- ASCAT R package☆180Updated last month