freeseek / scoreLinks
Tools to work with GWAS-VCF summary statistics files
☆122Updated 9 months ago
Alternatives and similar repositories for score
Users that are interested in score are comparing it to the libraries listed below
Sorting:
- Segmented HAPlotype Estimation and Imputation Tool☆84Updated last week
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆114Updated last week
- phasing and Allele Specific Expression from RNA-seq☆116Updated last year
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 5 months ago
- CrossMap is a python program to lift over genome coordinates from one genome version to another.☆85Updated 3 weeks ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆72Updated 10 months ago
- BAM Statistics, Feature Counting and Annotation☆150Updated 3 weeks ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆80Updated 2 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆140Updated last month
- WisecondorX — An evolved WISECONDOR☆100Updated 2 weeks ago
- Publication quality NGS track plotting☆114Updated 3 years ago
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆85Updated 2 weeks ago
- ☆123Updated 8 months ago
- Allele-specific alignment sorting☆58Updated 2 years ago
- Tip and tricks for BAM files☆85Updated 6 years ago
- A tool for profiling long STRs from short reads☆97Updated 4 years ago
- Script to automatically create and run IGV snapshot batchscripts☆141Updated 2 years ago
- A suite of tools for detecting expansions of short tandem repeats☆82Updated 2 years ago
- Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome☆68Updated last year
- Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project☆129Updated 2 weeks ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆162Updated 10 months ago
- Relevant papers for CNV and SV approaches☆94Updated 8 months ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆28Updated 5 months ago
- liftover for python, made fast with cython☆89Updated 2 months ago
- Somatic structural variant caller for long-read data☆71Updated last month
- TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C☆109Updated 4 years ago
- BISulfite-seq CUI Toolkit☆65Updated 6 months ago
- ☆130Updated last week
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆102Updated 4 years ago
- Burden testing against public controls☆50Updated last year