weizhou0 / GATE
☆19Updated last year
Related projects ⓘ
Alternatives and complementary repositories for GATE
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 2 months ago
- Statistical fine-mapping pipeline in FinnGen☆26Updated last week
- Analyses conducting GWAS across the UKBB diverse superpopulations☆47Updated last month
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆29Updated 10 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆33Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆40Updated 2 years ago
- Sequence kernel association test (SKAT)☆42Updated last year
- Genotype-based Prediction (GenoPred)☆68Updated last week
- Colocalization analysis of genetic association signals☆47Updated this week
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆40Updated 6 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆17Updated 2 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated last week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆49Updated last month
- Harmonise GWAS summary statistics against a reference VCF☆40Updated 3 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆15Updated 3 weeks ago
- GWAS for survival analysis in large cohorts☆19Updated 3 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆27Updated 5 months ago
- ☆25Updated 2 months ago
- QTL Discovery using Annotations☆23Updated last year
- ☆32Updated last year
- Scripts for implementing the Tractor pipeline☆45Updated 3 months ago
- Regional association plots☆25Updated 7 months ago
- package for the causal TWAS project☆38Updated 3 weeks ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- Fast, integrative fine mapping with functional data☆55Updated 5 years ago
- ☆17Updated 8 months ago
- GWAS Summary Statistics Data Harmonisation☆20Updated 2 weeks ago
- Partners Biobank genomics data QC☆25Updated 4 years ago