weizhou0 / GATELinks
☆23Updated 2 years ago
Alternatives and similar repositories for GATE
Users that are interested in GATE are comparing it to the libraries listed below
Sorting:
- Analyses conducting GWAS across the UKBB diverse superpopulations☆62Updated last month
- Genotype-based Prediction (GenoPred)☆76Updated last week
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Updated last year
- Documentation on new GWAS Summary Statistics Standard☆23Updated 2 weeks ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 6 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Colocalization analysis of genetic association signals☆53Updated 5 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated this week
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 5 months ago
- ☆45Updated 5 months ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 10 months ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated last month
- ☆37Updated 4 years ago
- Cross-population polygenic prediction☆91Updated 3 weeks ago
- ☆35Updated 2 years ago
- ☆63Updated 3 years ago
- Source code of FUMA GWAS web application☆60Updated 2 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- GWAS Summary Statistics Data Harmonisation☆25Updated last month
- Development for SAIGE and SAIGE-GENE(+)☆84Updated 3 weeks ago
- Sequence kernel association test (SKAT)☆52Updated 4 months ago
- Pariwise analysis of GWAS☆44Updated 7 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆87Updated 2 years ago
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Main ricopili repo for public releases☆50Updated 8 months ago
- Variational Inference of Polygenic Risk Scores☆28Updated 7 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 3 years ago
- Imputation of parental genotypes, inference of sibling IBD segments, family based GWAS, and polygenic score analyses.☆36Updated 2 months ago