☆24Jun 30, 2023Updated 2 years ago
Alternatives and similar repositories for GATE
Users that are interested in GATE are comparing it to the libraries listed below
Sorting:
- ☆17Aug 25, 2025Updated 6 months ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated 11 months ago
- GWAS Survival Package in R☆13Nov 16, 2023Updated 2 years ago
- GWAS for survival analysis in large cohorts☆22Jul 24, 2024Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆21Jul 4, 2022Updated 3 years ago
- ☆12Nov 26, 2025Updated 3 months ago
- Variational Inference of Polygenic Risk Scores☆28Apr 22, 2025Updated 10 months ago
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆11Jun 10, 2019Updated 6 years ago
- An R package for performing MultiSTAAR procedure in whole-genome sequencing studies☆11Nov 14, 2024Updated last year
- A tool to build a website to browse hundreds or thousands of GWAS.☆191Sep 11, 2025Updated 5 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆201Jul 6, 2023Updated 2 years ago
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 2 years ago
- ☆196May 2, 2022Updated 3 years ago
- Scripts for implementing the Tractor pipeline☆53Sep 4, 2025Updated 5 months ago
- Convert GWAS summary statistics to VCF☆48Mar 11, 2023Updated 2 years ago
- ☆13Jun 17, 2021Updated 4 years ago
- Data and code for the Effector index☆14Oct 13, 2020Updated 5 years ago
- Gaussian imputation of GWAS summary statistics☆15Apr 16, 2015Updated 10 years ago
- Analysis of the genomic architecture and functional role of myocardial trabeculae☆13Apr 4, 2024Updated last year
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Jan 26, 2024Updated 2 years ago
- ☆15Nov 22, 2022Updated 3 years ago
- ☆12Nov 1, 2022Updated 3 years ago
- Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…☆15Sep 5, 2019Updated 6 years ago
- CoMorMent-Containers☆36Feb 23, 2026Updated last week
- Meta-analysis of genomewide association scans☆63Jul 18, 2024Updated last year
- PRS pipeline using PRS_CS☆15Oct 21, 2025Updated 4 months ago
- ☆15Dec 7, 2023Updated 2 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Oct 15, 2021Updated 4 years ago
- ☆103Jun 26, 2022Updated 3 years ago
- R package of useful functions for one-sample Mendelian randomization and instrumental variable analyses☆24Updated this week
- ☆49Jun 24, 2025Updated 8 months ago
- Code used for the GWAS-by-subtraction of non-cognitive skills and follow-up analyses☆20Jan 15, 2021Updated 5 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆20Aug 13, 2025Updated 6 months ago
- ☆50Jul 9, 2025Updated 7 months ago
- ☆26Feb 15, 2018Updated 8 years ago
- ☆17Mar 21, 2023Updated 2 years ago
- R Functions to calculate power of GWAS studies for a single associated SNP, under various parameters. Suitable for classical (i.e. single…☆22Jul 19, 2018Updated 7 years ago
- An R package for creating mirrored Manhattan plots☆18Sep 30, 2022Updated 3 years ago
- Polygenic prediction via continuous shrinkage priors☆198Nov 21, 2024Updated last year