weizhou0 / GATELinks
☆23Updated 2 years ago
Alternatives and similar repositories for GATE
Users that are interested in GATE are comparing it to the libraries listed below
Sorting:
- Genotype-based Prediction (GenoPred)☆74Updated this week
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆58Updated last week
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆34Updated 4 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated last week
- Software for estimating correlation of trait effect sizes across populations☆50Updated 5 months ago
- Documentation on new GWAS Summary Statistics Standard☆23Updated last year
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Sequence kernel association test (SKAT)☆52Updated 2 months ago
- Colocalization analysis of genetic association signals☆53Updated 4 months ago
- ☆44Updated 4 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 3 years ago
- ☆37Updated 4 years ago
- GWAS Summary Statistics Data Harmonisation☆24Updated last month
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 8 months ago
- Development for SAIGE and SAIGE-GENE(+)☆84Updated last month
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆50Updated 7 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- ☆100Updated 3 years ago
- Pariwise analysis of GWAS☆44Updated 7 years ago
- Main ricopili repo for public releases☆50Updated 6 months ago
- ☆35Updated 2 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆41Updated 2 years ago
- Cross-population polygenic prediction☆90Updated 11 months ago
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆27Updated 2 months ago