weizhou0 / GATE
☆22Updated last year
Alternatives and similar repositories for GATE:
Users that are interested in GATE are comparing it to the libraries listed below
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 6 months ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 7 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆34Updated 4 years ago
- Software for estimating correlation of trait effect sizes across populations☆44Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last year
- ☆33Updated 7 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 6 years ago
- Colocalization analysis of genetic association signals☆51Updated 4 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Sequence kernel association test (SKAT)☆48Updated 2 months ago
- GWAS Summary Statistics Data Harmonisation☆22Updated 3 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 10 months ago
- Genotype-based Prediction (GenoPred)☆72Updated this week
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- ☆32Updated last year
- ☆21Updated last week
- GWAS for survival analysis in large cohorts☆21Updated 8 months ago
- Regional association plots☆25Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆20Updated 5 months ago
- QTL Discovery using Annotations☆24Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆49Updated last month
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆59Updated 5 months ago
- ☆19Updated last year
- Leveraging functional information to improve GWAS summary statistic imputation☆20Updated 3 years ago
- Partners Biobank genomics data QC☆26Updated 5 years ago
- Main ricopili repo for public releases☆46Updated this week
- ☆46Updated 5 months ago