Rare Disease variant reanalysis tool
☆89Nov 5, 2026Updated this week
Alternatives and similar repositories for talos
Users that are interested in talos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the…☆12Updated this week
- Fast Rust reimplementation of Ensembl VEP (Variant Effect Predictor): same flags and output formats, 100x+ faster☆48Updated this week
- Functional-trained variant effect predictor☆19Aug 27, 2026Updated 2 months ago
- Pathogenicity prediction and prioritization of genetic variants.☆20Sep 21, 2026Updated last month
- structural variant database software☆50Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- (WIP) best-practices workflow for rare disease☆64Jul 1, 2024Updated 2 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆42Updated this week
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆51Oct 14, 2023Updated 3 years ago
- fastVEP: High-performance Variant Effect Predictor in Rust☆160Updated this week
- using all the bits for echt rapid variant annotation and filtering☆166Jul 22, 2026Updated 3 months ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 11 months ago
- Blazingly fast, streaming duplicate detection for NGS data☆22Updated this week
- Svirlpool: structural variant detection from long read sequencing by local assembly☆10Oct 11, 2026Updated 3 weeks ago
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆173Mar 24, 2026Updated 7 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆19Mar 14, 2022Updated 4 years ago
- Spiritual successor to picard for sequencing qc☆65Oct 22, 2026Updated 2 weeks ago
- A Mendelian approach to variant effect prediction built in keras☆22Aug 22, 2026Updated 2 months ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Feb 20, 2026Updated 8 months ago
- ☆49Oct 11, 2026Updated 3 weeks ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆96Oct 30, 2025Updated last year
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆22Aug 7, 2023Updated 3 years ago
- Code used to generate manuscript figures and results.☆14Jan 10, 2024Updated 2 years ago
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Gene copy number prediction from k-mer frequencies☆18Apr 15, 2026Updated 6 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆37Sep 13, 2023Updated 3 years ago
- genetic variant expressions, annotation, and filtering for great good.☆274May 12, 2026Updated 5 months ago
- filtering trio-based genetic variants in VCFs for clinical review☆22Aug 18, 2020Updated 6 years ago
- Tool to find regions of homozygosity (ROHs) from sequencing data.☆37Jun 17, 2024Updated 2 years ago
- Geneyx Analysis API☆11Oct 14, 2026Updated 3 weeks ago
- Fast SAM/BAM sorter.☆12Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆75Updated this week
- CNV detection tool for WES data☆13Aug 21, 2024Updated 2 years ago
- Complex structural variant visualization for HiFi sequencing data☆51Aug 6, 2026Updated 3 months ago
- XOOS (sbX Optimized Open Source) Analysis Tools 🧬☆36Updated this week
- ☆110Apr 3, 2026Updated 7 months ago
- API-first variant triage pipeline combining genomic filtering, annotation, and LLM-driven interpretation for clinical genomics workflows☆21Apr 28, 2026Updated 6 months ago
- Repository to ZIP Plink2 LD files and have random access☆17Updated this week