AI-sandbox / XGMix
☆14Updated 2 years ago
Alternatives and similar repositories for XGMix:
Users that are interested in XGMix are comparing it to the libraries listed below
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- ☆14Updated 7 years ago
- ☆37Updated 4 months ago
- ☆16Updated last year
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 3 years ago
- GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with popula…☆36Updated last week
- Intersect multiple VCF files with haplotype awareness☆25Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated 9 months ago
- Repository for resources we'd like to share with the community.☆24Updated 2 years ago
- software package for integrative genetic association analysis☆34Updated last year
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆50Updated last year
- Fork of ricopili for development of pipeline for family-based data☆17Updated last year
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago
- ☆24Updated 8 months ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated 2 weeks ago
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆15Updated 2 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- ☆40Updated 7 years ago
- Simulation of rare and common variants based on 1000 genomes data☆18Updated 3 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆43Updated 2 years ago
- ☆20Updated last year
- Dirichlet Process based methods for subclonal reconstruction of tumours☆29Updated 3 months ago
- Tool for GWAS summary-level data analysis☆26Updated 4 years ago
- Interactive eQTL visualizations☆13Updated 2 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆38Updated last year
- Genetic maps interpolated to sites in the 1000 Genomes project☆47Updated 9 years ago
- GenoTypes Compressor☆15Updated 2 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago