Cross-platform software to draw phylogenetic trees
☆242Oct 3, 2025Updated 8 months ago
Alternatives and similar repositories for TreeViewer
Users that are interested in TreeViewer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SplitsTree App☆127Jun 1, 2026Updated last week
- Code Safety Inspection Service☆20Sep 23, 2022Updated 3 years ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆332Mar 12, 2026Updated 3 months ago
- A genome completeness evaluation tool based on miniprot☆245Sep 18, 2025Updated 8 months ago
- Using ggtree to build phylogenetic trees☆49Nov 6, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- BEAV: Bacterial Element Annotation reVamped☆77Aug 21, 2025Updated 9 months ago
- Align proteins to genomes with splicing and frameshift☆404Jan 5, 2026Updated 5 months ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆466Updated this week
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆66Sep 14, 2024Updated last year
- A grammar of graphics for comparative genomics☆764Feb 23, 2026Updated 3 months ago
- Tool for fully-automated inference of species trees from raw genome assemblies☆49May 30, 2026Updated 2 weeks ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆28Feb 12, 2026Updated 4 months ago
- Efficient phylogenetic tree inference for massive taxonomic datasets☆144Apr 6, 2025Updated last year
- GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click…☆87Dec 15, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Gene cluster comparison figure generator☆642Dec 22, 2025Updated 5 months ago
- ☆17Feb 16, 2026Updated 3 months ago
- pipeline for read mapping, snp calling and annotation for bacterial genomes☆13Mar 12, 2024Updated 2 years ago
- oxford dot plots☆171May 25, 2026Updated 2 weeks ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆231Apr 27, 2026Updated last month
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆86Jun 4, 2026Updated last week
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated 2 years ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆179Apr 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Improved Inference of Ortholog Groups using Hidden Markov Models☆39May 12, 2026Updated last month
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- ☆44Nov 20, 2021Updated 4 years ago
- Tool to plot synteny and structural rearrangements between genomes☆348Apr 7, 2025Updated last year
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆248Jun 5, 2026Updated last week
- Inference of ploidy and heterozygosity structure using whole genome sequencing data☆296May 28, 2026Updated 2 weeks ago
- PhyloFisher is a software package written in Python3 that can be used for the creation, analysis, and visualization of phylogenomic datas…☆36Apr 15, 2026Updated last month
- sensitive and precise assembly of short sequencing reads☆167Oct 11, 2024Updated last year
- Target / Integrative Genetic Element Retriever: precisely maps IGEs (a defined type of genomic island) in bacterial and archaeal genomes;…☆20Sep 2, 2025Updated 9 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Detection of incorrectly labeled sequences across kingdoms☆87Oct 25, 2022Updated 3 years ago
- a broadly applicable tool for automated gene identification and retrieval☆42Jun 4, 2026Updated last week
- Accurate Species TRee ALgorithm☆279Apr 1, 2024Updated 2 years ago
- ☆135Aug 29, 2024Updated last year
- A user-friendly workflow for phylogenomics☆229May 12, 2026Updated last month
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆189Mar 17, 2026Updated 2 months ago
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆36Apr 20, 2026Updated last month