abadona / qsimscanLinks
Automatically exported from code.google.com/p/qsimscan
☆13Updated 3 years ago
Alternatives and similar repositories for qsimscan
Users that are interested in qsimscan are comparing it to the libraries listed below
Sorting:
- Functional Analysis of Metagenomes by Likelihood Inference☆17Updated 5 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 3 years ago
- simple and not slow ORF caller☆21Updated 7 years ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 5 months ago
- ☆19Updated 8 years ago
- Identifying ViRal and Circular content in metAgenomes☆13Updated 6 years ago
- PanGenomePipeline☆16Updated last year
- CAMITAX: Taxon labels for microbial genomes☆29Updated last year
- Accurate, resource-frugal and deterministic DNA sequence classifier.☆34Updated last month
- ☆15Updated 11 months ago
- Compute strain abundance in a defined microbial community☆10Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆21Updated last month
- Strain-level abundances estimation in metagenomic samples using variation graphs☆25Updated 2 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Updated 6 years ago
- ☆31Updated 3 years ago
- KBase distribution module for RASTtk.☆13Updated 4 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 2 years ago
- ☆22Updated 2 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- A selection of short scripts for analyzing microbial genomes☆14Updated 6 years ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- De novo VIral Genome Annotator☆21Updated 8 months ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation☆30Updated 4 years ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Updated 6 years ago
- ☆23Updated 5 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆21Updated last year
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- Metagenomics-focused BAM file manipulation☆16Updated 5 years ago
- Analyze a set of genomes with the anvi'o pangenome pipeline☆17Updated last year