Niknafs / NGSToolsLinks
NGSTools
☆16Updated 8 years ago
Alternatives and similar repositories for NGSTools
Users that are interested in NGSTools are comparing it to the libraries listed below
Sorting:
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 6 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 2 weeks ago
- Location of public benchmarking; primarily final results☆18Updated 9 months ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- 🍶 Genome assembly with short sequence reads☆26Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated last month
- FREE Divergence Error-Correcting DNA Barcodes☆10Updated 7 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Fast sequencing data quality metrics☆30Updated 2 months ago
- simple library for dealing with SAM cigar strings☆41Updated 4 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆37Updated 5 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- for visual evaluation of read support for structural variation☆55Updated last year
- Personal diploid genome creation and coordinate conversion☆30Updated 7 months ago
- Merging paired-end reads and removing adapters☆30Updated 5 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆28Updated 3 weeks ago
- full taxonomer cython repository☆22Updated 5 years ago
- Two pass alignment for long reads☆22Updated 4 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆23Updated 2 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Split a BAM file by haplotype support☆16Updated 7 years ago
- ☆17Updated 3 months ago
- Tools for generating and decoding error-correcting DNA barcodes☆15Updated 3 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆30Updated last year
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 2 months ago