Transcription Factor Target Finder (TFTF) is an R package designed for predicting transcription factor target genes and predicting upstream transcription factors of target genes. (!!THE link will Resume access tomorrow)
☆26Jun 26, 2026Updated 3 weeks ago
Alternatives and similar repositories for TFTF
Users that are interested in TFTF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…☆21Jun 18, 2025Updated last year
- The GEO Cancer Analysis Suite (GCAS) is a versatile R package designed for analyzing and visualizing gene expression data in cancer resea…☆22Jun 26, 2026Updated 3 weeks ago
- Read and write 'Graphpad Prism' '.pzfx' files in R☆27Jan 16, 2026Updated 6 months ago
- BulkSignalR☆27Jun 23, 2026Updated last month
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…☆18May 25, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- 《Linux 不入门到入 门》网页：https://super9du.github.io/linux-primer/☆10Aug 7, 2022Updated 3 years ago
- ☆12Mar 5, 2024Updated 2 years ago
- CellRank's reproducibility repository.☆17Jan 13, 2022Updated 4 years ago
- BioCarta pathway images☆11Jan 30, 2026Updated 5 months ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Mar 21, 2021Updated 5 years ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆19Jan 16, 2026Updated 6 months ago
- The gsmr R-package implements the GSMR (Generalised Summary-data-based Mendelian Randomisation) method that uses GWAS summary statistics …☆22Apr 26, 2024Updated 2 years ago
- Identify cell type based on cell markers for single cell squencing☆12Jul 10, 2024Updated 2 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆16Dec 1, 2025Updated 7 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆15Nov 12, 2017Updated 8 years ago
- Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statisticall…☆40Updated this week
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- ☆15May 7, 2022Updated 4 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 5 years ago
- ☆18Jun 10, 2026Updated last month
- Python script to quickly extract promoter and terminator regions with the NCBI API. Search for the presence of individual pattern or tran…☆28Jun 4, 2025Updated last year
- BioTIP: Biological Tipping-Point Identification and Characterization☆24Oct 20, 2025Updated 9 months ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Apr 16, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…☆25Feb 5, 2024Updated 2 years ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆22Jun 10, 2026Updated last month
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆665Mar 11, 2026Updated 4 months ago
- ☆21Nov 15, 2024Updated last year
- Pseudotime Analysis for Bulk Data☆19Aug 2, 2024Updated last year
- Single-Cell Analysis of Immune Cells from Renal Clear Cell Carcinoma☆21Aug 15, 2021Updated 4 years ago
- Easy and comprehensive biological network reconstruction and analysis☆38Sep 15, 2025Updated 10 months ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆273Jul 10, 2026Updated 2 weeks ago
- ☆76Aug 16, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- tugHall: a simulator of cancer cell evolution based on the hallmarks of cancer, linked to the mutational states of tumor-related genes. T…☆13Dec 11, 2023Updated 2 years ago
- Iterative Gene clUster Analysis, a high-throughput method for gene cluster family identification.☆17Jun 4, 2026Updated last month
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 4 months ago
- ☆13Apr 5, 2024Updated 2 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Oct 29, 2021Updated 4 years ago
- ☆120Nov 12, 2022Updated 3 years ago
- Easy to define segments in y-axis for 'ggplot2'.☆27Oct 6, 2019Updated 6 years ago