YuLab-SMU / tigeRLinks
🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
☆33Updated 4 months ago
Alternatives and similar repositories for tigeR
Users that are interested in tigeR are comparing it to the libraries listed below
Sorting:
- ☆22Updated 2 years ago
- Pseudotime Analysis for Bulk Data☆18Updated last year
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- ☆37Updated 3 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆59Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 4 years ago
- Hierarchical Cell Annotation☆26Updated 11 months ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆14Updated 10 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated 11 months ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- ☆13Updated 7 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆10Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- ☆16Updated 4 years ago
- ☆33Updated 3 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆31Updated 2 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago
- A R package for advanced single cell data viz☆68Updated last month
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Updated 2 years ago
- ☆17Updated 2 years ago
- BulkSignalR☆24Updated 3 months ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆35Updated 2 years ago
- ☆50Updated 5 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆65Updated 11 months ago
- R package for Bioconductor submission☆37Updated 2 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago