Alternatives and similar repositories for mr_druggable_genome_pd

Users that are interested in mr_druggable_genome_pd are comparing it to the libraries listed below

• bar-woolf / TwoStepCisMR
  ☆13Updated 2 years ago
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆36Updated 5 months ago
• segrelabgenomics / TwoSampleMR_pipeline
  Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.
  ☆26Updated last year
• MRCIEU / gwasglue2
  Connecting GWAS summary data to analytical tools
  ☆21Updated last year
• MRCIEU / MRInstruments
  Data objects for various sets of instruments
  ☆44Updated 5 years ago
• globalbiobankmeta / multi-ancestry-pwmr
  Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper
  ☆18Updated last year
• fernandam93 / epiclocks_cancer
  This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…
  ☆14Updated 3 years ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆27Updated last week
• jean997 / cause
  R package for CAUSE
  ☆56Updated last year
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆38Updated last year
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆32Updated last year
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆24Updated 3 years ago
• cnfoley / mrclust
  R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.
  ☆17Updated 3 years ago
• explodecomputer / plinkbinr
  R package that contains plink binaries for windows, mac and linux
  ☆10Updated 5 years ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆40Updated last year
• rhhao / csMR
  Perform cell-stratified MR analysis through integrating GWAS and QTL data
  ☆30Updated 9 months ago
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆54Updated 4 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• LizaDarrous / PheWAS-cluster
  ☆20Updated 10 months ago
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆38Updated 4 months ago
• MRCIEU / epigraphdb-pqtl
  This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.
  ☆40Updated 4 years ago
• gamazonlab / MR-JTI
  ☆57Updated 6 months ago
• gqi / MRMix
  R package for performing Mendelian Randomization using mixture models
  ☆24Updated 5 years ago
• statgen / METAL
  Meta-analysis of genomewide association scans
  ☆57Updated 11 months ago
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆28Updated last year
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆29Updated 9 months ago
• hbliu / Kidney_Epi_Pri
  Kidney Epigenome and Transcriptome-based multi-stage Prioritization
  ☆17Updated 2 years ago
• ACDBio / AutoMR
  An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…
  ☆33Updated 2 years ago
• jrs95 / hyprcoloc
  Hypothesis Prioritisation in multi-trait Colocalization
  ☆54Updated last year