A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) and Proximity Network (PNA) assays.
☆22Oct 29, 2026Updated this week
Alternatives and similar repositories for pixelator
Users that are interested in pixelator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Library for analysis of Molecular Pixelation data in R (Pixelgen Technologies AB)☆10Oct 23, 2026Updated last week
- Pipeline to generate Proximity Network Assay data with Pixelator (Pixelgen Technologies AB)☆15Updated this week
- ☆16Mar 24, 2026Updated 7 months ago
- material related to the genetech courses☆10Sep 11, 2023Updated 3 years ago
- ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method …☆105Feb 11, 2026Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆36Jul 13, 2024Updated 2 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆30Oct 6, 2026Updated 3 weeks ago
- Reproducibility Repo for mvTCR paper☆14Apr 2, 2024Updated 2 years ago
- ☆15Jan 24, 2024Updated 2 years ago
- ☆30Oct 4, 2024Updated 2 years ago
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 4 years ago
- Provide programmatic access to the tonsil cell atlas datasets☆10Oct 22, 2026Updated last week
- Python package to generate high dimensional Flow Cytometry datasets using imputation by XGBoost regression☆13Sep 30, 2024Updated 2 years ago
- R package for large-scale CNV analysis from RNA-seq☆21Dec 21, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Spatial mapping of cell types by integration of transcriptomics data☆104Apr 25, 2026Updated 6 months ago
- Recognizing HGT Events in Assemblies☆10May 12, 2026Updated 5 months ago
- ☆18Feb 18, 2021Updated 5 years ago
- Awesome GRN enhanced AnnData toolkit☆13Feb 19, 2026Updated 8 months ago
- ☆18Jul 3, 2022Updated 4 years ago
- ☆10Nov 5, 2023Updated 2 years ago
- ☆23Dec 23, 2024Updated last year
- single-cell Contamination Detection and Correction☆19Jan 15, 2025Updated last year
- ☆21May 6, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Bioinformatics lecture slides 2014☆11Jun 26, 2016Updated 10 years ago
- Single-cell analysis with non-negative matrix factorization☆50Oct 17, 2026Updated 2 weeks ago
- ☆15Oct 10, 2023Updated 3 years ago
- DEPRECATED Lightweight bioinformatics pipeline tools using iPython☆14Dec 11, 2015Updated 10 years ago
- ☆40Jun 24, 2025Updated last year
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆24Jun 14, 2024Updated 2 years ago
- Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney☆27Mar 7, 2024Updated 2 years ago
- ☆12Feb 14, 2023Updated 3 years ago
- Activator tutorial for Akka getting people started with Supervision and Fault Handling☆11Sep 30, 2015Updated 11 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Multi-omic study of luminal breast cancer☆11Sep 11, 2023Updated 3 years ago
- ☆10Nov 18, 2022Updated 3 years ago
- Single-cell differential expression☆22Oct 18, 2026Updated last week
- ☆23Aug 25, 2022Updated 4 years ago
- ☆14Jun 6, 2024Updated 2 years ago
- Python package for the semi-supervised analysis of multi-omics data☆17Oct 15, 2025Updated last year
- ☆19May 25, 2026Updated 5 months ago