An end-to-end Single-Cell Omics analysis Pipeline designed to facilitate comprehensive analysis and exploration of single-cell omics data.
☆187Mar 20, 2026Updated last week
Alternatives and similar repositories for scop
Users that are interested in scop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- single-cell Contamination Detection and Correction☆17Jan 15, 2025Updated last year
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆630Mar 11, 2026Updated 2 weeks ago
- ☆41Feb 4, 2026Updated last month
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆298Mar 21, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- plotthis is an R package that is built upon ggplot2 and other plotting packages.☆85Mar 16, 2026Updated last week
- ☆21May 6, 2025Updated 10 months ago
- R package to infer biological activities from omics data using a collection of methods.☆286Dec 16, 2025Updated 3 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated this week
- An R package for visualising cell-cell interactions☆46Mar 16, 2026Updated last week
- ☆209Dec 6, 2025Updated 3 months ago
- A R package for advanced single cell data viz☆74Aug 29, 2025Updated 6 months ago
- One-step to Cluster and Visualize Gene Expression Matrix☆362Mar 7, 2026Updated 3 weeks ago
- Useful functions to make your scRNA-seq plot more cool!☆380Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 📦R包:Make TCGA download and prepare easy!☆153Sep 19, 2025Updated 6 months ago
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆915Updated this week
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆51Nov 1, 2025Updated 4 months ago
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆33Dec 15, 2025Updated 3 months ago
- user-friendly pipeline for GWAS fine-mapping☆12Mar 9, 2025Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Nov 9, 2023Updated 2 years ago
- UHCA☆11Jan 23, 2025Updated last year
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆82Dec 16, 2023Updated 2 years ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Nov 18, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆219Mar 2, 2026Updated 3 weeks ago
- a deep generative model for single-cell survival analysis☆16Dec 2, 2025Updated 3 months ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆229Mar 17, 2026Updated last week
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- R tools for analysis and visualization of single-cell subclustering data☆18Sep 9, 2025Updated 6 months ago
- tree-aggregated compositional analysis for high-throughput sequencing data☆10Aug 24, 2022Updated 3 years ago
- A package for reference mapping and nice visualization☆24Dec 16, 2025Updated 3 months ago
- vaginal microbiota☆13Jan 21, 2025Updated last year
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Create Regional Association Plots☆13Sep 7, 2025Updated 6 months ago
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆128May 30, 2025Updated 9 months ago
- R package implementation of Milo for testing for differential abundance in KNN graphs☆423Sep 4, 2025Updated 6 months ago
- Assembly and Annotation of the Human Immune Health Atlas☆20Aug 28, 2025Updated 7 months ago
- R package to visualize gene expression data based on weighted kernel density estimation☆112Feb 6, 2026Updated last month
- Machine learning-based integration model with elegant performance☆185Sep 23, 2025Updated 6 months ago
- ☆12Oct 1, 2025Updated 5 months ago