A Guide to the Analysis of Spatial Transcriptomics
☆12Jul 29, 2024Updated last year
Alternatives and similar repositories for ST_Analysis_Handbook
Users that are interested in ST_Analysis_Handbook are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- Implementation for Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).☆13Jul 15, 2024Updated last year
- Code for the paper "MetaQ: fast, scalable and accurate metacell inference via deep single-cell quantization"☆28Dec 7, 2024Updated last year
- Cell clustering and communication network inference for single-cell transcriptomics☆15Sep 18, 2024Updated last year
- single-cell Contamination Detection and Correction☆18Jan 15, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆20Jul 30, 2024Updated last year
- ☆34Feb 25, 2025Updated last year
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆10Nov 20, 2024Updated last year
- arkaine is AI for makers - a framework for small composable agents☆19Apr 25, 2025Updated last year
- Workshop 4 - Linear models☆15Sep 3, 2024Updated last year
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Mar 25, 2026Updated last month
- ☆22Nov 9, 2023Updated 2 years ago
- ☆25Feb 20, 2025Updated last year
- Code for ST_IGI package☆34Jul 10, 2025Updated 10 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆16Mar 16, 2026Updated last month
- Materials for Spring 2019 Applied Genomics Course☆21Apr 22, 2019Updated 7 years ago
- "Archaeogenetics analysis of Anatolia"☆14Jan 27, 2021Updated 5 years ago
- ☆61Feb 13, 2026Updated 2 months ago
- An intelligent command line interface for ChimeraX☆22Apr 30, 2026Updated last week
- 使用表达数据,对候选基因进行特征选择,然后构建诊断/预后模型,并使用SHAP分析特征的贡献策划的怒☆16Oct 16, 2025Updated 6 months ago
- benchmark for single-cell RNA-seq imputation methods☆30Mar 16, 2024Updated 2 years ago
- For managing 2P imaging datasets from preprocessing to activity trace extraction☆10Apr 12, 2019Updated 7 years ago
- Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data☆130Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Dec 11, 2023Updated 2 years ago
- Tracebacks for Humans (in Jupyter notebooks)☆12Dec 30, 2025Updated 4 months ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- An example of continuous integration and deployment of a sphinx project☆13Aug 25, 2023Updated 2 years ago
- A General Model for Learning and Decision-Making in Artificial Animals☆10Jun 18, 2017Updated 8 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆102Apr 16, 2026Updated 3 weeks ago
- a simply crawler framework☆12Jun 5, 2023Updated 2 years ago
- Gaussian blur in Fortran and Python. Handles masked input data.☆10Mar 16, 2015Updated 11 years ago
- ☆46May 4, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- ☆40Mar 5, 2024Updated 2 years ago
- ☆14Jan 24, 2024Updated 2 years ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 8 months ago
- Deep Learning Can Identify Explainable Reasoning Paths of Mechanism of Drug Action for Drug Repurposing from Multilayer Biological Networ…☆12Aug 19, 2024Updated last year
- Porting of Protein Activity and Pathway Inference to single cell and Python.☆14May 4, 2026Updated last week
- ☆43Jun 11, 2022Updated 3 years ago