ChIP peak Annotation, Comparison and Visualization
☆259Oct 6, 2026Updated 3 weeks ago
Alternatives and similar repositories for ChIPseeker
Users that are interested in ChIPseeker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MACS -- Model-based Analysis of ChIP-Seq☆789Updated this week
- A universal enrichment tool for interpreting omics data☆1,243Updated this week
- ChIP-seq analysis notes from Ming Tang☆854Aug 5, 2024Updated 2 years ago
- Visualization of Functional Enrichment Result☆259Oct 9, 2026Updated 2 weeks ago
- Tools to process and analyze deep sequencing data.☆772Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- HMMRATAC peak caller for ATAC-seq data☆101Nov 12, 2024Updated last year
- chromatin Variability Across Regions (of the genome!)☆198May 1, 2026Updated 5 months ago
- Disease Ontology Semantic and Enrichment analysis☆125Oct 18, 2026Updated last week
- ☆13Sep 17, 2026Updated last month
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆202Jan 30, 2026Updated 9 months ago
- Visualization and annotation of phylogenetic trees☆935Sep 14, 2026Updated last month
- Unify Dimensionality Reduction Results☆15Oct 13, 2026Updated 2 weeks ago
- Simplify functional enrichment results☆128Jan 30, 2026Updated 9 months ago
- Quick mining and visualization of NGS data by integrating genomic databases☆272May 5, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MeSH Enrichment and Semantic analyses☆13Sep 28, 2026Updated last month
- ENCODE ChIP-seq pipeline☆283Feb 15, 2024Updated 2 years ago
- Multi-sample multi-group scRNA-seq analysis tools☆248Jul 6, 2026Updated 3 months ago
- Circular visualization in R☆1,027Nov 11, 2023Updated 2 years ago
- ☆102Jun 16, 2026Updated 4 months ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆44Aug 27, 2026Updated 2 months ago
- python module to plot beautiful and highly customizable genome browser tracks☆906Oct 3, 2026Updated 3 weeks ago
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆245Updated this week
- Transcript assembly and quantification for RNA-Seq☆534Aug 9, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- GREAT Analysis - Functional Enrichment on Genomic Regions☆100Jan 30, 2026Updated 9 months ago
- Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.☆506Feb 25, 2026Updated 8 months ago
- Visualizing publication-quality multiple sequence alignment using ggplot2☆220Updated this week
- Application for making ENCODE Blacklists☆350Apr 23, 2021Updated 5 years ago
- GENome Organisation Visual Analytics☆91Feb 3, 2026Updated 8 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆33Nov 3, 2022Updated 3 years ago
- Visualize and annotate genomic coverage with ggplot2☆273Jan 24, 2025Updated last year
- Single-cell Transcriptome and Regulome Analysis Pipeline☆312Mar 6, 2023Updated 3 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆84Mar 16, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 5 years ago
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆348Apr 23, 2024Updated 2 years ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆259Aug 3, 2026Updated 2 months ago
- Make Complex Heatmaps☆1,561Apr 2, 2026Updated 6 months ago
- Tutorial Website☆68Feb 1, 2021Updated 5 years ago
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆504Jul 7, 2026Updated 3 months ago
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆94Aug 13, 2026Updated 2 months ago