ChIP peak Annotation, Comparison and Visualization
☆256Apr 29, 2026Updated last month
Alternatives and similar repositories for ChIPseeker
Users that are interested in ChIPseeker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A universal enrichment tool for interpreting omics data☆1,210Updated this week
- MACS -- Model-based Analysis of ChIP-Seq☆776May 6, 2026Updated last month
- ChIP-seq analysis notes from Ming Tang☆851Aug 5, 2024Updated last year
- Visualization of Functional Enrichment Result☆258Apr 29, 2026Updated last month
- Tools to process and analyze deep sequencing data.☆761Jul 23, 2025Updated 10 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- HMMRATAC peak caller for ATAC-seq data☆100Nov 12, 2024Updated last year
- ☆13May 5, 2026Updated last month
- chromatin Variability Across Regions (of the genome!)☆191May 1, 2026Updated last month
- Disease Ontology Semantic and Enrichment analysis☆126Updated this week
- ☆15Jul 25, 2025Updated 10 months ago
- Visualization and annotation of phylogenetic trees☆926Apr 29, 2026Updated last month
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆201Jan 30, 2026Updated 4 months ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆42Feb 22, 2022Updated 4 years ago
- Quick mining and visualization of NGS data by integrating genomic databases☆273May 5, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simplify functional enrichment results☆126Jan 30, 2026Updated 4 months ago
- MeSH Enrichment and Semantic analyses☆12Apr 29, 2026Updated last month
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆484Apr 10, 2026Updated 2 months ago
- python module to plot beautiful and highly customizable genome browser tracks☆887Jul 10, 2024Updated last year
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆14Aug 5, 2020Updated 5 years ago
- ☆99Jul 6, 2025Updated 11 months ago
- Circular visualization in R☆1,017Nov 11, 2023Updated 2 years ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆248Updated this week
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆62Jul 20, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Fast alignment and preprocessing of chromatin profiles☆222Mar 20, 2026Updated 2 months ago
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆92Jan 23, 2025Updated last year
- GREAT Analysis - Functional Enrichment on Genomic Regions☆98Jan 30, 2026Updated 4 months ago
- a complete reference book for clusterProfiler and its sub-packages☆16Aug 12, 2021Updated 4 years ago
- ENCODE ChIP-seq pipeline☆280Feb 15, 2024Updated 2 years ago
- Summer School 2019 - Functional Genomics☆20Jul 24, 2019Updated 6 years ago
- Multi-sample multi-group scRNA-seq analysis tools☆232Updated this week
- TCGAbiolinks☆351Oct 7, 2025Updated 8 months ago
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆241May 27, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Detecting sites of genomic enrichment☆201May 8, 2023Updated 3 years ago
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 2 weeks ago
- Make Complex Heatmaps☆1,507Apr 2, 2026Updated 2 months ago
- Application for making ENCODE Blacklists☆341Apr 23, 2021Updated 5 years ago
- A One-Click System for Analyzing Loop-Resolution Hi-C Experiments☆486Aug 31, 2025Updated 9 months ago
- miRTrace☆12Jun 14, 2023Updated 2 years ago
- ENCODE ATAC-seq pipeline☆452Jul 18, 2024Updated last year