YuLab-SMU / ChIPseekerLinks
ChIP peak Annotation, Comparison and Visualization
☆237Updated 2 months ago
Alternatives and similar repositories for ChIPseeker
Users that are interested in ChIPseeker are comparing it to the libraries listed below
Sorting:
- Visualization of Functional Enrichment Result☆246Updated 2 months ago
- ☆202Updated 3 months ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆324Updated last month
- R package for DNA methylation analysis☆232Updated 4 months ago
- Quick mining and visualization of NGS data by integrating genomic databases☆267Updated 2 years ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆192Updated last year
- dN/dS methods to quantify selection in cancer and somatic evolution☆222Updated last month
- Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.☆467Updated last week
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- A short tutorial on how to use RSEM☆137Updated 5 years ago
- Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …☆221Updated last year
- Application for making ENCODE Blacklists☆313Updated 4 years ago
- A collection of scripts and notes related to genomics and bioinformatics☆214Updated 3 months ago
- Clone of the Bioconductor repository for the SingleR package.☆191Updated this week
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆170Updated 4 years ago
- Table of software for the analysis of single-cell RNA-seq data.☆327Updated this week
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆254Updated 5 months ago
- Detecting sites of genomic enrichment☆192Updated 2 years ago
- ATAC-seq peak-calling and QC analysis pipeline☆206Updated this week
- ☆94Updated 2 months ago
- Differential analysis of RNA-Seq☆305Updated last month
- Introduction to bulk RNA-seq☆114Updated 2 months ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆216Updated 2 weeks ago
- Web application to explore the Sequence Read Archive.☆218Updated 3 months ago
- ☆138Updated 6 years ago
- Codebook from my GWAS cookbook☆192Updated 3 years ago
- Batch effect adjustment based on negative binomial regression for RNA sequencing count data☆182Updated 4 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 7 months ago
- Fast Gene Set Enrichment Analysis☆409Updated last week
- Generate IGV style locus tracks from bigWig files in R☆164Updated 8 months ago