jokergoo / simplifyEnrichmentLinks
Simplify functional enrichment results
☆121Updated last year
Alternatives and similar repositories for simplifyEnrichment
Users that are interested in simplifyEnrichment are comparing it to the libraries listed below
Sorting:
- An R interface to enrichR☆93Updated 10 months ago
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 5 months ago
- Bayesian mixed-effect model to test differences in cell type proportions from single-cell data, in R☆117Updated last week
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- R package of colors for the Buenrostro Lab☆86Updated last year
- mgatk: mitochondrial genome analysis toolkit☆109Updated 11 months ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆80Updated this week
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆78Updated 7 months ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- ☆62Updated 5 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 11 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Bayesian network plot for the enrichment analysis results☆66Updated last year
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 7 years ago
- ☆63Updated last year
- A repository of pipelines for single-cell data in Nextflow DSL2☆79Updated 2 years ago
- Easily install and load packages from the tidyomics ecosystem☆72Updated last month
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆124Updated 8 months ago
- ☆56Updated last week
- GREAT Analysis - Functional Enrichment on Genomic Regions☆95Updated last week
- Links to ATAC-seq analysis tools☆74Updated 4 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆55Updated 4 years ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆105Updated 3 years ago
- An R interface to the MEME Suite☆54Updated 6 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- DNA methylation analysis notes from Ming Tang☆92Updated 6 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- Identify and correct invalid gene symbols☆60Updated last year
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 3 months ago