Disease Ontology Semantic and Enrichment analysis
☆125Oct 4, 2026Updated this week
Alternatives and similar repositories for DOSE
Users that are interested in DOSE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Visualization of Functional Enrichment Result☆260Updated this week
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Jan 27, 2020Updated 6 years ago
- MeSH Enrichment and Semantic analyses☆13Sep 28, 2026Updated last week
- GO-terms Semantic Similarity Measures☆75Sep 26, 2026Updated 2 weeks ago
- A universal enrichment tool for interpreting omics data☆1,241Oct 3, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ChIP peak Annotation, Comparison and Visualization☆259Updated this week
- Gene set variation analysis☆248Updated this week
- dplyr verbs for clusterProfiler outputs☆13Mar 12, 2020Updated 6 years ago
- download files in R using wget -c☆16Aug 20, 2025Updated last year
- Reactome Pathway Analysis☆46Sep 26, 2026Updated 2 weeks ago
- R client for the OmniPath web service☆175Sep 30, 2026Updated last week
- Interactively analyze single cell genomic data☆190Updated this week
- Write PubMed search results with two display options (citation or listview) to PDF or Word☆13Oct 18, 2020Updated 5 years ago
- AUCell: score single cells with gene regulatory networks☆206Mar 9, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- TRAjectory-based Differential Expression analysis for SEQuencing data☆315Jun 17, 2025Updated last year
- Utilities for manipulating chromosome names, including modifying them to follow a particular naming style☆37May 22, 2026Updated 4 months ago
- Code for EpiMap data browser☆14Jun 4, 2024Updated 2 years ago
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆12Jan 22, 2020Updated 6 years ago
- Extension of SpatialExperiment with sf☆58Sep 26, 2026Updated last week
- A Toolbox for Spatial Transcriptomics Analysis☆172May 6, 2025Updated last year
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆127Apr 16, 2025Updated last year
- ☆15Jul 25, 2025Updated last year
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆348Apr 23, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fast Gene Set Enrichment Analysis☆458Sep 22, 2026Updated 2 weeks ago
- ☆74May 28, 2025Updated last year
- Interpretation of cell states using reference single-cell maps☆327Dec 19, 2025Updated 9 months ago
- R package to visualize gene expression data based on weighted kernel density estimation☆116Feb 6, 2026Updated 8 months ago
- useful functions for ggplot☆18Jul 2, 2026Updated 3 months ago
- Clone of the Bioconductor repository for the SingleR package.☆205Sep 10, 2026Updated last month
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆14Jul 3, 2012Updated 14 years ago
- Table of software for the analysis of single-cell RNA-seq data.☆343Updated this week
- ☆35Jul 17, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Easy single cell analysis platform for enrichment☆236Aug 9, 2026Updated 2 months ago
- R package for Bioconductor submission☆41Dec 8, 2022Updated 3 years ago
- This is the ensembldb development repository.☆36Jun 6, 2026Updated 4 months ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆342Feb 10, 2026Updated 7 months ago
- Methods for detecting doublets in single-cell sequencing data☆272Updated this week
- A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)☆16Feb 9, 2026Updated 8 months ago
- Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.☆189Jan 8, 2026Updated 9 months ago