ENCODE-DCC / chip-seq-pipeline2Links
ENCODE ChIP-seq pipeline
☆271Updated last year
Alternatives and similar repositories for chip-seq-pipeline2
Users that are interested in chip-seq-pipeline2 are comparing it to the libraries listed below
Sorting:
- Intro to ChIPseq using HPC☆310Updated 2 years ago
- Application for making ENCODE Blacklists☆317Updated 4 years ago
- ATAC-seq peak-calling and QC analysis pipeline☆208Updated last month
- ENCODE ATAC-seq pipeline☆427Updated last year
- zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs☆283Updated last year
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆222Updated 2 months ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆418Updated last year
- Collections of library structure and sequence of popular single cell genomic methods☆474Updated 3 months ago
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆218Updated last month
- GTEx & TOPMed data production and analysis pipelines☆377Updated 2 months ago
- Analysis Pipeline for Single Cell ATAC-seq☆318Updated 2 years ago
- Quick mining and visualization of NGS data by integrating genomic databases☆266Updated 2 years ago
- ☆137Updated 6 years ago
- RNA-seq workflow using STAR and DESeq2☆344Updated last year
- parallel fastq-dump wrapper☆299Updated 2 years ago
- ☆205Updated last week
- SUPPA: Fast quantification of splicing and differential splicing☆279Updated last year
- TCR and BCR assembly from RNA-seq data☆323Updated 2 weeks ago
- ☆270Updated 9 months ago
- A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.☆192Updated 2 months ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆170Updated 4 years ago
- Table of software for the analysis of single-cell RNA-seq data.☆329Updated this week
- A collection of scripts and notes related to genomics and bioinformatics☆216Updated last month
- ☆94Updated 3 months ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆398Updated 2 weeks ago
- Step-by-step analysis pipeline for RNA-seq data☆140Updated last year
- ☆443Updated 5 years ago
- Single cell RNA sequencing analysis course☆221Updated 4 months ago
- A short tutorial on how to use RSEM☆138Updated 5 years ago
- ☆154Updated 2 years ago