alosdiallo / DNA_Rchitect
A Shiny App for visualizing genomic data
☆19Updated 2 years ago
Alternatives and similar repositories for DNA_Rchitect:
Users that are interested in DNA_Rchitect are comparing it to the libraries listed below
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- a set of NGS pipelines☆24Updated this week
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- R package wrapping bedtools☆38Updated this week
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆14Updated 4 years ago
- HOT regions paper☆11Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- A tidy interface for coverage analysis☆24Updated 5 years ago
- An R package to interpret biological trends from DNA methylation data☆16Updated 2 years ago
- 📊 An R package of RNA-seq workflow☆16Updated 2 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆19Updated 6 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 11 months ago
- Genomic plot in trellis layout☆39Updated 11 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- A toolkit for working with ATAC-seq data.☆24Updated 8 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated last month
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 6 months ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 2 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- Summer school course materials collection☆25Updated 6 years ago
- An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps☆21Updated 6 years ago
- Read HOMER motif analysis output in R.☆15Updated 6 years ago
- Query the gene models of a given organism/assembly☆26Updated 3 months ago