alosdiallo / DNA_Rchitect
A Shiny App for visualizing genomic data
☆18Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for DNA_Rchitect
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆42Updated last week
- 📊 An R package of RNA-seq workflow☆15Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated this week
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆17Updated 4 years ago
- Make rapid visualizations of RNA-seq data in R☆18Updated 5 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- R package wrapping bedtools☆37Updated 2 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated last month
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆27Updated 9 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆25Updated 3 years ago
- HOT regions paper☆11Updated 5 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆15Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 3 months ago
- A tidy interface for coverage analysis☆24Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 8 months ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated last month
- ☆28Updated 4 months ago
- Molecular Signatures Database (MSigDB) in a data frame☆17Updated 5 years ago
- interactive plots for differential expression analysis☆25Updated 2 months ago
- Omics Data Analysis Tools☆11Updated this week
- An R package to interpret biological trends from DNA methylation data☆16Updated 2 years ago
- R interface to the JBrowse 2 Linear Genome View.☆35Updated 8 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 2 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆34Updated last year
- Functional enrichment analysis of high-throughput omics data☆20Updated 4 years ago
- ☆15Updated last month