Alternatives and similar repositories for snphub:

Users that are interested in snphub are comparing it to the libraries listed below

• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆17Updated 2 years ago
• YaoLab-Bioinfo / LIRBase
  A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
  ☆16Updated 3 years ago
• akiomiyao / tif
  Transposon Insertion Finder - Detection of new TE insertions in NGS data
  ☆20Updated 2 years ago
• YaoLab-Bioinfo / ECOGEMS
  Efficient compression and retrieve of genotype data with integer sparse matrices
  ☆16Updated last year
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 2 years ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated last month
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆41Updated this week
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆23Updated 2 years ago
• ListerLab / TEPID
  Transposable element polymorphism identification
  ☆32Updated 4 years ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆25Updated 2 years ago
• carringtonlab / TargetFinder
  Plant small RNA target prediction tool
  ☆26Updated 8 years ago
• YaoLab-Bioinfo / funRiceGenes
  The knowledge of cloned rice genes lost in the information of rice functional genomics studies
  ☆24Updated last year
• hemstrow / snpR
  ☆29Updated last week
• NBISweden / GUESSmyLT
  An efficient way to guess the library type of your RNA-Seq data.
  ☆30Updated 2 years ago
• YaoLab-Bioinfo / intansv
  Integrative analysis of structural variations.
  ☆40Updated last year
• tpook92 / HaploBlocker
  R-package: Calculation of haplotype blocks and libraries
  ☆30Updated 10 months ago
• jbelyeu / SV-plaudit
  Pipeline for structural variant image curation and analysis.
  ☆48Updated 3 years ago
• JaeYoonKim72 / GMStool
  ☆16Updated 4 years ago
• hangelwen / miR-PREFeR
  microRNA PREdiction From small RNA-seq data
  ☆29Updated 7 years ago
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆25Updated 2 years ago
• stephenturner / adapters
  Adapters for trimming
  ☆30Updated 5 years ago
• bcbc-group / CyVerese_SNP_calling_webinar
  ☆10Updated 4 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆11Updated 5 years ago
• whweve / IntAssoPlot
  ☆16Updated 11 months ago
• bjfupoplar / PlantPseudo
  ☆11Updated 5 years ago
• YTLogos / BnaSNPDB
  An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
  ☆12Updated 7 months ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆24Updated 4 years ago
• czc / nb_distribution
  novoBreak: local assembly for breakpoint detection in cancer genomes
  ☆26Updated 6 years ago
• MerrimanLab / selectionTools
  Pipeline to take VCF through to Selection Analysis.
  ☆58Updated 2 years ago
• bhofmei / jbplugin-smallrna
  JBrowse plugin that supports smallRNA alignments
  ☆12Updated 5 years ago