A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.
☆20Oct 28, 2024Updated last year
Alternatives and similar repositories for snphub
Users that are interested in snphub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Mar 4, 2025Updated last year
- Customized codes used in Tibetan wheat sequencing project.☆13Oct 18, 2022Updated 3 years ago
- The IntroBlocker ancestry inference algorithm☆18Oct 24, 2023Updated 2 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- ProteoStorm: An Ultrafast Metaproteomics Database Search Framework☆11Jul 15, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- R interface to the JBrowse 2 Linear Genome View.☆40Updated this week
- ☆17Jul 3, 2018Updated 8 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- Perform GWAS with gemma in a simple pipeline☆27Apr 26, 2025Updated last year
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Apr 11, 2025Updated last year
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45May 15, 2025Updated last year
- A web application that keeps track of real-time spread of COVID19 in India as well as across the world.☆13Jun 3, 2022Updated 4 years ago
- A novel algorithm with high detection power for BSA-Seq data analysis - the significant structural variant method☆36Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Nov 4, 2021Updated 4 years ago
- ☆11Nov 17, 2020Updated 5 years ago
- Parse command-line arguments and simple variable interpolation☆17Feb 6, 2026Updated 5 months ago
- Tao Yan's Plot Toolkit☆12Aug 20, 2019Updated 6 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆14Oct 10, 2022Updated 3 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 7 years ago
- RelocaTE2☆19Oct 6, 2023Updated 2 years ago
- ☆29Oct 20, 2023Updated 2 years ago
- ☆17Jul 29, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HIBLUP is an Integration of Statistical Methods Under BLUP Framework for Genomic Selection and Prediction☆30Oct 15, 2021Updated 4 years ago
- ☆27Jul 28, 2025Updated 11 months ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated 2 years ago
- ☆19Sep 20, 2020Updated 5 years ago
- ggplot2 grab bag.☆16Nov 30, 2025Updated 7 months ago
- Documentation for the Helium pedigree visualization software☆17Apr 3, 2024Updated 2 years ago
- Note: tabix and bgzip binaries are now part of the HTSlib project.☆92Aug 3, 2021Updated 4 years ago
- ☆23Oct 30, 2022Updated 3 years ago
- Parallel implementation of OrthoMCL☆21Aug 26, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- npm from R☆19Jan 22, 2024Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆34Updated this week
- GWAS catalogue for Arabidopsis thaliana☆11Feb 29, 2024Updated 2 years ago
- Implementation of the multiple sequential markovian coalescent☆92Aug 5, 2025Updated 11 months ago
- ☆29Nov 22, 2020Updated 5 years ago
- ☆16Jun 12, 2020Updated 6 years ago
- Semantic Similarity in Bio-Ontologies☆18Jan 30, 2026Updated 5 months ago