douglasgscofield / bioinfo
Various bioinformatics tools
☆20Updated 6 months ago
Alternatives and similar repositories for bioinfo
Users that are interested in bioinfo are comparing it to the libraries listed below
Sorting:
- circos pipeline☆20Updated 4 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Transposable element polymorphism identification☆33Updated 4 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆33Updated 6 years ago
- ☆24Updated 7 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated 2 years ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- Gene model transfer from closely related reference genomes using cDNA alignments☆10Updated 4 years ago
- ☆29Updated last year
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Updated last year
- ☆25Updated 2 months ago
- SV genotyping with long reads☆40Updated last year
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 2 years ago
- Tutorial on using popular tools for learning about population history☆50Updated 6 years ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- An easy way to run BioNano genomic analysis☆27Updated 4 years ago
- Transposable Elements MOvement detection using LOng reads☆21Updated last week
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Tools to convert to and from vcf format☆14Updated 7 years ago
- ☆43Updated 8 years ago
- Calculate circos format data of GC content and GC skew from genome data.☆11Updated 10 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- Conditional Reciprocal Best Blast☆41Updated 8 years ago
- ☆32Updated 4 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 4 months ago
- A pipeline for isoseq☆23Updated 6 years ago
- ☆23Updated last year
- TGS scaffolding☆46Updated 3 years ago