Vitek-Lab / MSstatsLinks
R package - MSstats
☆89Updated last week
Alternatives and similar repositories for MSstats
Users that are interested in MSstats are comparing it to the libraries listed below
Sorting:
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆40Updated last week
- Differential Expression Analysis tool box R lang package for omics data☆47Updated last month
- Report processing and protein quantification for MS-based proteomics☆52Updated 2 years ago
- PDV: an integrative proteomics data viewer☆59Updated 6 months ago
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆47Updated 6 months ago
- The repo for LFQ-Analyst☆30Updated last year
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated 6 months ago
- ☆24Updated 2 years ago
- This is a collection of minimal code to visualize various aspects of proteomics data.☆82Updated 4 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 5 months ago
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆60Updated 4 months ago
- R-Shiny GUI integrated with the MSstats package family☆19Updated this week
- Imputing proteomics data using deep learning models☆31Updated 2 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆67Updated 2 weeks ago
- An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.☆27Updated 10 months ago
- Methods for label-free mass spectrometry proteomics☆15Updated 10 months ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆101Updated this week
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 8 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Updated 2 weeks ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆26Updated 3 weeks ago
- Base Classes and Functions for Mass Spectrometry and Proteomics☆136Updated 5 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Updated 3 weeks ago
- Picotti lab data analysis package.☆66Updated last week
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated last month
- Quantitative features for mass spectrometry data☆29Updated 3 weeks ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 3 years ago
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆13Updated 3 years ago
- ☆68Updated last year
- tidymass☆60Updated 2 weeks ago
- ☆12Updated 3 years ago