Alternatives and similar repositories for protigy:

Users that are interested in protigy are comparing it to the libraries listed below

• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆38Updated last month
• pnnl / leapR
  ☆17Updated last month
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆26Updated last week
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆59Updated 5 months ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated last year
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆22Updated last month
• bzhanglab / OmicsEV
  A tool for large scale omics datasets evaluation
  ☆24Updated last year
• arnesmits / DEP
  DEP package
  ☆28Updated 2 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆18Updated this week
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆26Updated 5 months ago
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆21Updated 3 years ago
• lagelab / Genoppi
  Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data
  ☆27Updated 8 months ago
• showteeth / scfetch
  Access and Format Single-cell RNA-seq Datasets from Public Resources
  ☆34Updated 3 weeks ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆48Updated 5 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 3 years ago
• liuhong-jia / scAnno
  ☆23Updated last year
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆43Updated last year
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆42Updated last week
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆29Updated 5 months ago
• bzhanglab / WebGestaltR
  R package for WebGestalt
  ☆34Updated last week
• SlavovLab / SCoPE2
  ☆18Updated last year
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated last year
• tidymass / tidymass
  tidymass
  ☆54Updated last year
• carpentries-incubator / bioc-rnaseq
  Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
  ☆21Updated this week
• grimbough / biomaRt
  R package providing query functionality to BioMart instances like Ensembl
  ☆38Updated 5 months ago
• Vitek-Lab / MSstatsShiny
  R-Shiny GUI integrated with the MSstats package family
  ☆15Updated last week
• tidyomics / tidy-genomics-talk
  ☆16Updated last year
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆49Updated 4 months ago
• dzhang32 / dasper
  Detecting Aberrant Splicing Events from RNA-sequencing data
  ☆16Updated last month