Converter functions for the MSstats package
☆10Updated this week
Alternatives and similar repositories for MSstatsConvert
Users that are interested in MSstatsConvert are comparing it to the libraries listed below
Sorting:
- R package - MSstats☆91Feb 21, 2026Updated last week
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆30Jul 28, 2025Updated 7 months ago
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆13Feb 18, 2026Updated last week
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Dec 17, 2025Updated 2 months ago
- R-Shiny GUI integrated with the MSstats package family☆20Updated this week
- R package for analysing proteomics data☆50Apr 17, 2023Updated 2 years ago
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆36Feb 28, 2025Updated last year
- Implementation of multiplex Leiden for analysis of spatial omics data☆17Feb 2, 2026Updated 3 weeks ago
- A graphical EDA tool☆14Jan 9, 2023Updated 3 years ago
- ☆10Dec 17, 2025Updated 2 months ago
- Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data☆11Sep 3, 2025Updated 5 months ago
- Bob Pruzek and Jim Helmreich's implementation of Elemental Graphics for Analysis of Variance☆16Mar 8, 2025Updated 11 months ago
- ImageJ macro for microglia morphology analysis☆17Jan 13, 2026Updated last month
- ☆14Feb 21, 2024Updated 2 years ago
- ☆16Nov 5, 2024Updated last year
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated last year
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆14Dec 5, 2025Updated 2 months ago
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 4, 2024Updated 2 years ago
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- ☆14Feb 11, 2020Updated 6 years ago
- This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.☆13Feb 6, 2026Updated 3 weeks ago
- ggplots for nested data☆10Jul 17, 2024Updated last year
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆51Aug 12, 2025Updated 6 months ago
- The Microbiome Interpretable Temporal Rule Engine☆46May 26, 2021Updated 4 years ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆47Oct 13, 2025Updated 4 months ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Feb 7, 2025Updated last year
- Python playground for cell-type-specific biology☆12Jan 20, 2026Updated last month
- a deep generative model for single-cell survival analysis☆16Dec 2, 2025Updated 2 months ago
- N-Gram Analysis of Biological Sequences☆10Aug 30, 2024Updated last year
- Material for the Pearson × O’Reilly Live Training Session "Hands-On Data Visualization with ggplot2: Concepts"☆11Aug 29, 2023Updated 2 years ago
- ProteoStorm: An Ultrafast Metaproteomics Database Search Framework☆11Jul 15, 2023Updated 2 years ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Mar 17, 2025Updated 11 months ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆12Dec 15, 2025Updated 2 months ago
- 📈A 'ggplot2' Extension for Visualizing Density, Distribution, Hazard, or Survival Functions using the 'logspline' Package☆12Jun 18, 2019Updated 6 years ago
- Package for adding some multivariate visualizations to ggplot2☆15Sep 7, 2025Updated 5 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- ☆12Jan 29, 2026Updated last month
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆12Aug 17, 2023Updated 2 years ago
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 5 years ago