Converter functions for the MSstats package
☆10Mar 3, 2026Updated 2 weeks ago
Alternatives and similar repositories for MSstatsConvert
Users that are interested in MSstatsConvert are comparing it to the libraries listed below
Sorting:
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆30Jul 28, 2025Updated 7 months ago
- R package - MSstats☆93Mar 13, 2026Updated last week
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆13Feb 26, 2026Updated 3 weeks ago
- R-Shiny GUI integrated with the MSstats package family☆20Mar 13, 2026Updated last week
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Dec 17, 2025Updated 3 months ago
- R package for analysing proteomics data☆50Apr 17, 2023Updated 2 years ago
- The Microbiome Interpretable Temporal Rule Engine☆46May 26, 2021Updated 4 years ago
- ☆14Feb 11, 2020Updated 6 years ago
- A graphical EDA tool☆14Jan 9, 2023Updated 3 years ago
- Find Co-Abundant Groups of Genes☆11Aug 3, 2020Updated 5 years ago
- A biblatex implementation of the Nature bibliography style☆14Dec 30, 2020Updated 5 years ago
- Tutorials☆14Apr 2, 2022Updated 3 years ago
- 📈A 'ggplot2' Extension for Visualizing Density, Distribution, Hazard, or Survival Functions using the 'logspline' Package☆12Jun 18, 2019Updated 6 years ago
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆36Mar 5, 2026Updated 2 weeks ago
- ProteoStorm: An Ultrafast Metaproteomics Database Search Framework☆11Jul 15, 2023Updated 2 years ago
- Python implementation of de Bruijn graph for genome assembly☆13May 24, 2014Updated 11 years ago
- Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data☆11Sep 3, 2025Updated 6 months ago
- Dirichlet-Multinomial Bayesian Variable Selection☆14Jun 13, 2024Updated last year
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 5 years ago
- Material for the Pearson × O’Reilly Live Training Session "Hands-On Data Visualization with ggplot2: Concepts"☆11Aug 29, 2023Updated 2 years ago
- A Shiny wrapper for the UpSetR R package (https://github.com/hms-dbmi/UpSetR).☆21Aug 28, 2017Updated 8 years ago
- Linear Models for Microarray Data☆12Apr 2, 2014Updated 11 years ago
- ☆12Updated this week
- Implementations in both Matlab and R of the CIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/s…☆19May 19, 2023Updated 2 years ago
- traditional bibliography styles with biblatex☆32Mar 6, 2021Updated 5 years ago
- ☆25Feb 3, 2025Updated last year
- Bob Pruzek and Jim Helmreich's implementation of Elemental Graphics for Analysis of Variance☆17Mar 8, 2025Updated last year
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆47Oct 13, 2025Updated 5 months ago
- A python library for Collective Matrix Factorization (CMF)☆25Aug 17, 2018Updated 7 years ago
- An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps☆21Apr 3, 2018Updated 7 years ago
- Package for adding some multivariate visualizations to ggplot2☆15Sep 7, 2025Updated 6 months ago
- A command-line interface and python module for R's GSVA bioconductor package☆13Jul 8, 2018Updated 7 years ago
- Implementation of multiplex Leiden for analysis of spatial omics data☆17Feb 2, 2026Updated last month
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Mar 17, 2025Updated last year
- Classifying RNAs as lncRNAs by ensemble machine learning algorithms☆10Dec 8, 2022Updated 3 years ago
- N-Gram Analysis of Biological Sequences☆10Aug 30, 2024Updated last year
- Repository of the paper "Defining Locality for Surrogates in Post-hoc Interpretablity" published at 2018 ICML Workshop on Human Interpret…☆17Nov 9, 2021Updated 4 years ago
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago