Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an MIT license.
☆12Apr 5, 2023Updated 3 years ago
Alternatives and similar repositories for SCP_recommendations
Users that are interested in SCP_recommendations are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19May 26, 2026Updated last month
- Closed-loop feedback optogenetic system☆10Apr 5, 2022Updated 4 years ago
- Single cell proteomics data processing☆32Apr 6, 2026Updated 2 months ago
- ☆18Apr 17, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆67Mar 14, 2024Updated 2 years ago
- Imputing proteomics data using deep learning models☆35Updated this week
- Tiny cutscenes creation tool with animation crossfades, path following and camera splines.☆13Aug 23, 2018Updated 7 years ago
- AlphaFind: Discover structure similarity across the entire known proteome☆27Apr 14, 2026Updated 2 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆39Updated this week
- Benchmark agents on BioML tasks☆72Sep 14, 2025Updated 9 months ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- ☆13Feb 12, 2024Updated 2 years ago
- Multiscale Atlas of Gene expression for Integrative Cortical Cartography☆15Feb 8, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ALD study data analysis☆13Feb 16, 2023Updated 3 years ago
- ☆45Jan 10, 2022Updated 4 years ago
- Interactive applications of stlearn☆16May 1, 2023Updated 3 years ago
- ☆12Updated this week
- EuBIC 2023 developer's meeting☆13Jan 16, 2023Updated 3 years ago
- Comp neuro course at BU☆28Dec 2, 2025Updated 6 months ago
- A set of files to do genomics analysis on python☆19Jun 5, 2025Updated last year
- Python library for analyzing mass spectrometry proteomics data.☆15Mar 20, 2024Updated 2 years ago
- A comprehensive R package for label-free proteomics data analysis and modeling☆16May 7, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This repository is used for the HeaDS git and GitHub workshop 2023☆18Apr 22, 2026Updated 2 months ago
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆24Jun 30, 2025Updated last year
- ☆17Sep 13, 2024Updated last year
- Client to access ExperimentHub resources☆11Jun 15, 2026Updated 2 weeks ago
- The Synthetic Biology Open Language (SBOL)☆23Apr 25, 2023Updated 3 years ago
- ☆18May 29, 2021Updated 5 years ago
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 4 years ago
- Course website for Genomic Data Visualization 2024☆27Mar 15, 2024Updated 2 years ago
- ☆15Apr 26, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆70Jun 7, 2023Updated 3 years ago
- R package for analysing proteomics data☆49Apr 17, 2023Updated 3 years ago
- Documentation for the limpa Bioconductor package, which implements quantification and differential analysis of mass-spectrometry proteomi…☆20Mar 25, 2026Updated 3 months ago
- SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression pro…☆15Oct 16, 2017Updated 8 years ago
- DeepHazard: Neural Network for Time Varying Risks☆15Dec 24, 2020Updated 5 years ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆22Aug 16, 2024Updated last year
- An introductory course to Python by the Center of Health Data Science (University of Copenhagen)☆22May 4, 2026Updated last month