☆29Mar 16, 2023Updated 3 years ago
Alternatives and similar repositories for SBGNview
Users that are interested in SBGNview are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆22May 4, 2026Updated 2 months ago
- pathway based data integration and visualization☆49Mar 28, 2025Updated last year
- Reproducible GSEA Benchmarking☆14May 14, 2026Updated 2 months ago
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 4 months ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Jan 7, 2020Updated 6 years ago
- Calculate the dn/ds (also pn and ps) value of cds☆14Jul 11, 2020Updated 6 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated 2 years ago
- Gene Family Annotation Workflow☆12Mar 26, 2024Updated 2 years ago
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 6 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆30Mar 5, 2018Updated 8 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 4 months ago
- Create KEGG.db Package☆66Jan 29, 2026Updated 5 months ago
- Kinase Activity Predictions from shotgun proteomics☆13Apr 18, 2017Updated 9 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆21Jun 10, 2025Updated last year
- Multisample Variant Format ToolKit☆10Oct 12, 2021Updated 4 years ago
- ☆30Mar 4, 2022Updated 4 years ago
- base documentation site for Singularity software☆27Feb 15, 2022Updated 4 years ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Fast and frugal disk based k-mer counter☆14Apr 1, 2021Updated 5 years ago
- ☆12Jan 16, 2025Updated last year
- A Swiss-Army-Knife for Bioinformaticians☆15Jul 3, 2026Updated 2 weeks ago
- Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new t…☆17Jun 23, 2026Updated 3 weeks ago
- A 'time'-like utility for Unix that measures peak memory usage☆18Jun 5, 2024Updated 2 years ago
- ☆12Jan 8, 2026Updated 6 months ago
- ☆15Jan 13, 2021Updated 5 years ago
- Function Enrichment analysis and Network construction☆16Apr 25, 2026Updated 2 months ago
- Single sample pathway analysis tools for omics data☆15Nov 9, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Seamlessly integrate R packages into Python.☆21Apr 12, 2023Updated 3 years ago
- Genome haplotype assembly and assessment method☆12Nov 24, 2023Updated 2 years ago
- Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method☆18Dec 29, 2022Updated 3 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Jun 22, 2016Updated 10 years ago
- 🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips☆84Updated this week
- Pipeline for Ribosome Profiling Data☆19Jul 5, 2023Updated 3 years ago
- Visualing species tree from ASTRAL with gene tree discordance☆33Jul 3, 2026Updated 2 weeks ago